Detailed information NTG0349311

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EYB46_RS10325
• Genome accession: NZ_CP036518
• Coordinates: 2127541..2128653 (-)
• Length: 370 a.a.
• NCBI ID: WP_007409910.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain ANSB01E
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2122541..2133653

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EYB46_RS10310 (EYB46_10305)	gyrA	2122630..2125089 (-)	2460	WP_032875298.1	DNA gyrase subunit A	-
EYB46_RS10315 (EYB46_10310)	gyrB	2125305..2127221 (-)	1917	WP_007409911.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
EYB46_RS10320 (EYB46_10315)	-	2127278..2127523 (-)	246	WP_004392908.1	extracellular matrix/biofilm biosynthesis regulator RemA family protein	-
EYB46_RS10325 (EYB46_10320)	recF	2127541..2128653 (-)	1113	WP_007409910.1	DNA replication/repair protein RecF	Machinery gene
EYB46_RS10330 (EYB46_10325)	rlbA	2128669..2128884 (-)	216	WP_004392910.1	ribosome maturation protein RlbA	-
EYB46_RS10335 (EYB46_10330)	dnaN	2129019..2130155 (-)	1137	WP_007409909.1	DNA polymerase III subunit beta	-
EYB46_RS10340 (EYB46_10335)	dnaA	2130340..2131680 (-)	1341	WP_007409908.1	chromosomal replication initiator protein DnaA	-
EYB46_RS10350 (EYB46_10345)	rpmH	2132300..2132434 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
EYB46_RS10355 (EYB46_10350)	rnpA	2132589..2132939 (+)	351	WP_004392944.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42430.36 Da
• Isoelectric Point: 7.0882

>NTDB_id=349311 EYB46_RS10325 WP_007409910.1 2127541..2128653(-) (recF) [Bacillus velezensis strain ANSB01E]
MYIQNLELTSYRNYERAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDEDYAKIEGRVMKRNGD
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSAVYLYDLSLYQKILSQR
NHFLKQLQSRKQTDRTMLDVLTDQLIEAAAKVVAKRLQFTAQLEKWAQPIHSGISRGLEELTLKYHTALDVSDPKDLSKI
GNSYQESFSKLKEKEIERGVTLFGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHDTLHQAGMFRVENGTLVK

Nucleotide

• Length: 1113 bp

>NTDB_id=349311 EYB46_RS10325 WP_007409910.1 2127541..2128653(-) (recF) [Bacillus velezensis strain ANSB01E]
TTGTATATCCAAAATTTAGAATTAACATCCTACCGTAATTATGAGCGCGCTGAGCTTCAATTCGAAAACAAGGTGAATGT
GATCATCGGAGAAAATGCCCAAGGCAAAACCAATTTGATGGAAGCCATCTATGTCCTTTCGATGGCAAAGTCACACCGCA
CCTCAAATGACAAAGAACTTATACGGTGGGACGAAGACTATGCTAAAATAGAAGGAAGAGTGATGAAGCGTAACGGGGAC
ATCCCGATGCAGCTTGTCATCTCCAAAAAAGGTAAAAAGGGCAAGGTCAATCATATAGAGCAGCAAAAACTCAGTCAGTA
TGTCGGAGCGCTGAACACCATTATGTTTGCCCCTGAGGATTTAAATCTCGTCAAAGGAAGCCCTCAGGTGAGGAGGAGAT
TTCTCGATATGGAGATCGGGCAGGTTTCTGCCGTTTATCTGTATGATTTATCTCTTTATCAAAAAATCCTTTCACAGCGG
AATCATTTTCTGAAACAGCTGCAAAGCCGGAAACAGACTGACCGGACTATGCTTGACGTTCTCACTGATCAGCTGATTGA
AGCAGCCGCAAAAGTTGTCGCCAAACGTCTGCAGTTTACGGCACAGCTTGAAAAATGGGCGCAGCCGATCCATTCCGGCA
TTTCCCGGGGACTTGAAGAACTGACGCTTAAGTATCACACGGCGCTTGATGTATCAGATCCCAAAGATTTGTCGAAAATA
GGTAACAGCTACCAGGAGTCTTTTTCGAAATTAAAAGAAAAAGAAATAGAACGAGGCGTCACATTATTCGGACCGCATCG
GGATGATGTCCTTTTTTATGTGAACGGACGCGATGTGCAGACGTACGGTTCACAGGGACAGCAGCGTACGACGGCTTTGT
CTTTGAAGCTGGCCGAAATAGATTTGATTCATGAAGAAATCGGAGAATACCCCATTTTACTTTTGGATGATGTACTAAGC
GAGCTGGATGATTACCGACAGTCCCATTTGCTTCATACGATCCAAGGCCGTGTGCAGACATTTGTCACCACGACAAGCGT
GGATGGCATTGACCACGATACCTTACATCAAGCAGGAATGTTCCGTGTGGAAAACGGTACGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	94.324	100	0.943