Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EZZ81_RS24240 Genome accession   NZ_CP036495
Coordinates   5464106..5464516 (-) Length   136 a.a.
NCBI ID   WP_029243104.1    Uniprot ID   -
Organism   Pseudomonas viridiflava strain Psy35     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5459106..5469516
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EZZ81_RS24225 (EZZ81_24600) - 5461018..5463060 (-) 2043 WP_004884366.1 methyl-accepting chemotaxis protein -
  EZZ81_RS24230 (EZZ81_24605) - 5463139..5463678 (-) 540 WP_029243103.1 chemotaxis protein CheW -
  EZZ81_RS24235 (EZZ81_24610) pilH 5463693..5464058 (-) 366 WP_004884368.1 twitching motility response regulator PilH -
  EZZ81_RS24240 (EZZ81_24615) pilG 5464106..5464516 (-) 411 WP_029243104.1 twitching motility response regulator PilG Regulator
  EZZ81_RS24245 (EZZ81_24620) gshB 5464750..5465709 (+) 960 WP_025993545.1 glutathione synthase -
  EZZ81_RS24250 (EZZ81_24625) - 5465930..5466832 (+) 903 WP_029243105.1 energy transducer TonB -
  EZZ81_RS24255 (EZZ81_24630) - 5466910..5467482 (+) 573 WP_004884372.1 YqgE/AlgH family protein -
  EZZ81_RS24260 (EZZ81_24635) ruvX 5467482..5467922 (+) 441 WP_004884373.1 Holliday junction resolvase RuvX -
  EZZ81_RS24265 (EZZ81_24640) pyrR 5468020..5468532 (+) 513 WP_025993543.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15109.64 Da        Isoelectric Point: 8.5349

>NTDB_id=349156 EZZ81_RS24240 WP_029243104.1 5464106..5464516(-) (pilG) [Pseudomonas viridiflava strain Psy35]
MEQHLTALKVMVIDDSKTIRRTAETLLRNVGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKARGRAVGSDQFLTKPFSKEELLSAIKAHVPSFVAVEQHIP

Nucleotide


Download         Length: 411 bp        

>NTDB_id=349156 EZZ81_RS24240 WP_029243104.1 5464106..5464516(-) (pilG) [Pseudomonas viridiflava strain Psy35]
ATGGAACAGCACCTCACAGCCTTGAAAGTCATGGTCATCGATGACTCGAAGACCATTCGCCGTACCGCCGAAACGCTGTT
GAGAAACGTCGGCTGTGAAGTCATCACGGCCATCGACGGTTTCGATGCGCTGGCCAAGATTGCCGATAACCACCCGCGCA
TCATATTCGTCGATATCATGATGCCGCGTCTGGATGGCTATCAGACCTGTGCCCTGATCAAGAACAATCGAGCGTTCAAG
TCCACGCCTGTCATTATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAGGGGGCGGGCTGTGGGGTCGGATCAGTT
TCTGACCAAGCCATTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCCCATGTGCCGAGCTTCGTTGCAGTAGAACAAC
ACATACCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.016

93.382

0.691

Multiple sequence alignment