Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EZZ79_RS02380 Genome accession   NZ_CP036493
Coordinates   522770..523180 (+) Length   136 a.a.
NCBI ID   WP_002551738.1    Uniprot ID   A0AAT9SFQ2
Organism   Pseudomonas syringae strain Psy33     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 517770..528180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EZZ79_RS02355 (EZZ79_02500) pyrR 518644..519156 (-) 513 WP_003316735.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  EZZ79_RS02360 (EZZ79_02510) ruvX 519399..519839 (-) 441 WP_002551734.1 Holliday junction resolvase RuvX -
  EZZ79_RS02365 (EZZ79_02515) - 519839..520411 (-) 573 WP_003392236.1 YqgE/AlgH family protein -
  EZZ79_RS02370 (EZZ79_02520) - 520487..521389 (-) 903 WP_003316738.1 energy transducer TonB -
  EZZ79_RS02375 (EZZ79_02525) gshB 521556..522515 (-) 960 WP_003316740.1 glutathione synthase -
  EZZ79_RS02380 (EZZ79_02530) pilG 522770..523180 (+) 411 WP_002551738.1 twitching motility response regulator PilG Regulator
  EZZ79_RS02385 (EZZ79_02535) pilH 523227..523592 (+) 366 WP_003316741.1 twitching motility response regulator PilH -
  EZZ79_RS02390 (EZZ79_02540) - 523607..524146 (+) 540 WP_003316742.1 chemotaxis protein CheW -
  EZZ79_RS02395 (EZZ79_02545) - 524197..526239 (+) 2043 WP_003414357.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14943.42 Da        Isoelectric Point: 8.5283

>NTDB_id=349086 EZZ79_RS02380 WP_002551738.1 522770..523180(+) (pilG) [Pseudomonas syringae strain Psy33]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=349086 EZZ79_RS02380 WP_002551738.1 522770..523180(+) (pilG) [Pseudomonas syringae strain Psy33]
ATGGAACAACACGCCTCCGCCCTGAAAGTCATGGTCATCGATGATTCGAAGACCATCCGCCGCACCGCCGAAACACTGCT
CAAGAACGCAGGTTGTGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCGCGAA
TCATATTCGTCGATATCATGATGCCGCGTCTGGACGGTTATCAGACCTGCGCGCTGATCAAGAACAACCGGGCATTCAAA
TCGACGCCGGTCATCATGCTGTCCTCCAAGGACGGTCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACAAC
ACATATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691

Multiple sequence alignment