Detailed information NTG0034903

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: TERTU_RS01120
• Genome accession: NC_012997
• Coordinates: 268082..269086 (+)
• Length: 334 a.a.
• NCBI ID: WP_015820929.1
• Uniprot ID: C6AQY9
• Organism: Teredinibacter turnerae T7901
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 263082..274086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TERTU_RS01100 (TERTU_0244)	-	263568..263783 (+)	216	WP_015818151.1	hypothetical protein	-
TERTU_RS01105 (TERTU_0245)	-	263864..266749 (-)	2886	WP_015818640.1	class I adenylate cyclase	-
TERTU_RS01110 (TERTU_0246)	coaD	266846..267334 (-)	489	WP_015819787.1	pantetheine-phosphate adenylyltransferase	-
TERTU_RS01115 (TERTU_0247)	rsmD	267446..268021 (-)	576	WP_015819336.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
TERTU_RS01120 (TERTU_0248)	pilA	268082..269086 (+)	1005	WP_015820929.1	signal recognition particle-docking protein FtsY	Machinery gene
TERTU_RS01125 (TERTU_0249)	ftsE	269109..269786 (+)	678	WP_015817317.1	cell division ATP-binding protein FtsE	-
TERTU_RS01130 (TERTU_0250)	ftsX	269788..270762 (+)	975	WP_015816904.1	permease-like cell division protein FtsX	-
TERTU_RS01135 (TERTU_0251)	rpoH	270930..271784 (+)	855	WP_015820626.1	RNA polymerase sigma factor RpoH	-
TERTU_RS01140 (TERTU_0252)	-	271801..272235 (+)	435	WP_019601366.1	DUF423 domain-containing protein	-
TERTU_RS01145 (TERTU_0253)	trmB	272269..272958 (+)	690	WP_015820344.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
TERTU_RS01150 (TERTU_0255)	-	273389..273955 (+)	567	WP_015818644.1	TIGR02444 family protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 35549.64 Da
• Isoelectric Point: 5.1078

>NTDB_id=34903 TERTU_RS01120 WP_015820929.1 268082..269086(+) (pilA) [Teredinibacter turnerae T7901]
MFFKSKKSKSESPESEAVAQPAEKPTEKVSFFTRIKQGLSRTSNQLSGGLASLLLGKKAIDDELLEEIETLLLMADVGVE
ATTDIIDDLTARVARKQLADSDALYAALRQSLADLLLDVEAPLDVECAQKPFVILVVGVNGVGKTTTIGKLAKRFQNQGK
SVMLAAGDTFRAAAVEQLQVWGERNKVPVVAQHTGADSASVIYDAVQSAQARQIDVVIADTAGRLHNKSNLMEELAKVKR
VMAKLDDSAPHEVLLVLDAGTGQNALSQAGHFKEAAGVTGLALTKLDGTAKGGIIFALSKQYGLPVRYIGVGEGIDDLQP
FQATSFIDALFGTE

Nucleotide

• Length: 1005 bp

>NTDB_id=34903 TERTU_RS01120 WP_015820929.1 268082..269086(+) (pilA) [Teredinibacter turnerae T7901]
ATGTTTTTTAAGAGCAAAAAAAGCAAATCCGAAAGCCCCGAGAGCGAAGCTGTGGCCCAGCCAGCGGAGAAGCCCACAGA
AAAGGTCAGCTTCTTTACCCGCATCAAACAGGGCTTATCCCGCACCAGTAACCAGCTGTCTGGCGGGCTGGCGAGTTTGC
TGCTGGGCAAAAAGGCTATTGACGACGAGCTGCTTGAAGAAATCGAAACTCTGTTGTTGATGGCCGATGTAGGGGTTGAA
GCCACCACCGATATTATTGACGATCTCACCGCGCGAGTTGCACGCAAGCAGTTGGCCGATTCGGACGCGCTCTACGCGGC
GCTGCGCCAGTCCCTCGCCGACTTGTTGCTGGATGTTGAGGCGCCACTGGATGTGGAGTGCGCACAAAAGCCATTCGTTA
TTCTTGTGGTCGGCGTCAATGGGGTAGGCAAAACCACCACCATCGGCAAACTCGCCAAACGTTTTCAAAACCAGGGCAAA
TCTGTGATGTTAGCCGCCGGCGATACTTTCCGCGCTGCAGCGGTGGAGCAATTGCAGGTATGGGGCGAGCGCAATAAGGT
GCCCGTGGTGGCTCAGCACACGGGCGCGGATAGCGCATCTGTTATTTACGATGCAGTACAGTCAGCGCAGGCGCGGCAAA
TCGATGTGGTGATCGCAGACACCGCCGGCCGCTTGCACAACAAGAGCAATCTGATGGAGGAACTGGCCAAGGTCAAACGG
GTCATGGCCAAGCTGGATGACAGCGCACCGCATGAAGTGCTTTTGGTGTTAGACGCGGGTACCGGCCAGAATGCGCTGTC
ACAGGCGGGGCATTTCAAAGAGGCTGCAGGTGTGACCGGGCTGGCGCTGACCAAGCTGGATGGCACAGCGAAAGGCGGTA
TTATCTTTGCTCTCAGCAAACAGTATGGCCTGCCGGTGCGCTATATCGGTGTCGGCGAAGGCATAGACGATTTGCAGCCA
TTCCAGGCCACTAGCTTTATCGATGCACTGTTCGGGACAGAATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (131-331)

• SRP54-type protein, helical bundle domain (SRP54_N) (46-112)

3D structure

• AlphaFold DB: C6AQY9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	54.747	94.611	0.518