Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   GJE05_RS10845 Genome accession   NZ_CP045960
Coordinates   2087178..2087684 (-) Length   168 a.a.
NCBI ID   WP_002226759.1    Uniprot ID   Q9JWB0
Organism   Neisseria meningitidis strain AUSMDU00005726     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2082178..2092684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJE05_RS10830 (GJE05_10830) - 2082486..2083493 (+) 1008 WP_154079715.1 IS5 family transposase -
  GJE05_RS10840 (GJE05_10840) polA 2084240..2087032 (-) 2793 WP_002239192.1 DNA polymerase I -
  GJE05_RS10845 (GJE05_10845) luxS 2087178..2087684 (-) 507 WP_002226759.1 S-ribosylhomocysteine lyase Regulator
  GJE05_RS10850 (GJE05_10850) - 2087706..2088125 (-) 420 WP_002239193.1 DUF2251 domain-containing protein -
  GJE05_RS10855 (GJE05_10855) cyaY 2088158..2088481 (-) 324 WP_002239194.1 iron donor protein CyaY -
  GJE05_RS10860 (GJE05_10860) lptM 2088552..2088722 (+) 171 WP_002225850.1 LPS translocon maturation chaperone LptM -
  GJE05_RS10865 (GJE05_10865) lysA 2088733..2089977 (+) 1245 WP_002239195.1 diaminopimelate decarboxylase -
  GJE05_RS10870 (GJE05_10870) - 2090013..2090105 (-) 93 WP_002233157.1 methionine/alanine import family NSS transporter small subunit -
  GJE05_RS10875 (GJE05_10875) - 2090102..2091637 (-) 1536 WP_002218096.1 sodium-dependent transporter -
  GJE05_RS10880 (GJE05_10880) - 2091850..2092503 (-) 654 WP_002239196.1 IS1595 family transposase -

Sequence

Protein


Download         Length: 168 a.a.        Molecular weight: 18725.49 Da        Isoelectric Point: 5.5451

>NTDB_id=348964 GJE05_RS10845 WP_002226759.1 2087178..2087684(-) (luxS) [Neisseria meningitidis strain AUSMDU00005726]
MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCVPNKEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMQDVLNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLARKVAVNKNEELT
LDEGLLNA

Nucleotide


Download         Length: 507 bp        

>NTDB_id=348964 GJE05_RS10845 WP_002226759.1 2087178..2087684(-) (luxS) [Neisseria meningitidis strain AUSMDU00005726]
ATGCCCCTACTAGACAGTTTCAAAGTCGATCACACCCGTATGCATGCCCCCGCCGTACGCGTGGCGAAAACCATGACCAC
GCCCAAAGGCGACACCATTACCGTGTTCGACCTGCGCTTTTGCGTTCCCAACAAAGAAATCCTGCCTGAAAAAGGCATCC
ACACGCTGGAGCATTTGTTTGCAGGCTTTATGCGCGACCACTTGAACGGAAACGGCGTGGAAATCATCGACATTTCCCCG
ATGGGCTGCCGCACCGGTTTTTATATGAGTTTGATTGGTACGCCTTCCGAACAGCAGGTTGCCGATGCGTGGCTCGCTTC
GATGCAGGATGTTTTGAATGTCAAAGACCAAAGCAAAATCCCCGAGTTGAACGAATACCAATGCGGCACTTATCAAATGC
ACTCGCTCGCCGAAGCGCAGCAAATCGCGCAAAACGTGTTGGCGCGCAAAGTGGCGGTGAACAAAAACGAAGAGCTGACG
CTGGATGAAGGGCTGCTGAACGCCTAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9JWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

77.246

99.405

0.768