Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EYF70_RS02265 Genome accession   NZ_CP036401
Coordinates   526511..526909 (+) Length   132 a.a.
NCBI ID   WP_131143945.1    Uniprot ID   A0A411WSM4
Organism   Pseudoduganella albidiflava strain DSM 17472     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 521511..531909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EYF70_RS02240 (EYF70_02240) corA 521795..522760 (+) 966 WP_131143941.1 magnesium/cobalt transporter CorA -
  EYF70_RS02245 (EYF70_02245) - 522926..523387 (-) 462 WP_131143942.1 cytochrome-c oxidase -
  EYF70_RS02250 (EYF70_02250) hemL 523658..524944 (-) 1287 WP_131143943.1 glutamate-1-semialdehyde 2,1-aminomutase -
  EYF70_RS02255 (EYF70_02255) - 524941..525789 (-) 849 WP_131143944.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  EYF70_RS02260 (EYF70_02260) - 525933..526085 (+) 153 WP_131148850.1 rubredoxin -
  EYF70_RS02265 (EYF70_02265) pilG 526511..526909 (+) 399 WP_131143945.1 PleD family two-component system response regulator Regulator
  EYF70_RS02270 (EYF70_02270) - 526921..527286 (+) 366 WP_131143946.1 response regulator transcription factor -
  EYF70_RS02275 (EYF70_02275) - 527286..527885 (+) 600 WP_131143947.1 chemotaxis protein CheW -
  EYF70_RS02280 (EYF70_02280) - 527906..530197 (+) 2292 WP_131143948.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14170.43 Da        Isoelectric Point: 7.8822

>NTDB_id=348774 EYF70_RS02265 WP_131143945.1 526511..526909(+) (pilG) [Pseudoduganella albidiflava strain DSM 17472]
MTTTPQATGLTIMVIDDSSTIRRSAEIFLSGAGYQVVLAEDGFDALAKIIDHQPALIFCDILMPRLDGYQTCALIKKSAK
FHATPVLMLSSRDGLFDRARGAMVGSAAYLTKPFSKDSLLAAVREHAGPGRP

Nucleotide


Download         Length: 399 bp        

>NTDB_id=348774 EYF70_RS02265 WP_131143945.1 526511..526909(+) (pilG) [Pseudoduganella albidiflava strain DSM 17472]
ATGACGACAACGCCGCAAGCGACCGGTTTGACCATCATGGTGATCGATGACAGCAGCACGATCCGCCGGTCCGCCGAGAT
CTTCCTGAGCGGGGCGGGGTACCAGGTGGTGCTGGCCGAGGATGGCTTCGATGCGCTGGCCAAGATCATCGACCACCAGC
CCGCGCTGATCTTCTGCGACATCCTGATGCCCCGGCTGGACGGTTACCAGACCTGCGCGCTGATCAAGAAGAGCGCGAAA
TTCCATGCCACGCCCGTGCTGATGCTGTCGTCCAGGGATGGCCTGTTCGACCGGGCGCGCGGCGCGATGGTCGGCTCGGC
CGCCTACCTCACCAAACCCTTCAGCAAGGACAGCCTGCTGGCCGCGGTGCGCGAGCATGCCGGTCCCGGGCGTCCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A411WSM4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

60.833

90.909

0.553

Multiple sequence alignment