Detailed information NTG0348774

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: GJE17_RS08520
• Genome accession: NZ_CP045930
• Coordinates: 1731080..1732186 (+)
• Length: 368 a.a.
• NCBI ID: WP_011185108.1
• Uniprot ID: Q5X9A5
• Organism: Streptococcus pyogenes strain AUSMDU00010539
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1726080..1737186

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJE17_RS08495 (GJE17_08495)	pgsA	1726189..1726731 (-)	543	WP_002991432.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
GJE17_RS08500 (GJE17_08500)	-	1726745..1727770 (-)	1026	WP_011285332.1	helix-turn-helix domain-containing protein	-
GJE17_RS08505 (GJE17_08505)	yfmH	1727820..1729109 (-)	1290	WP_002991436.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
GJE17_RS08510 (GJE17_08510)	yfmF	1729111..1730355 (-)	1245	WP_030127514.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
GJE17_RS08515 (GJE17_08515)	yaaA	1730665..1731078 (+)	414	WP_011889257.1	S4 domain-containing protein YaaA	-
GJE17_RS08520 (GJE17_08520)	recF	1731080..1732186 (+)	1107	WP_011185108.1	DNA replication/repair protein RecF	Machinery gene
GJE17_RS08525 (GJE17_08525)	-	1732242..1733105 (-)	864	WP_002992310.1	GRP family sugar transporter	-
GJE17_RS08530 (GJE17_08530)	guaB	1733307..1734788 (-)	1482	WP_002991454.1	IMP dehydrogenase	-
GJE17_RS08535 (GJE17_08535)	trpS	1735096..1736118 (-)	1023	WP_002991455.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41795.71 Da
• Isoelectric Point: 7.8294

>NTDB_id=348774 GJE17_RS08520 WP_011185108.1 1731080..1732186(+) (recF) [Streptococcus pyogenes strain AUSMDU00010539]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRISGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLAGYGARVMEHRIDFINALEKEANTHHQAISNGLESLSLSYQSSVVFDKKTNIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTVQIDSDIH

Nucleotide

• Length: 1107 bp

>NTDB_id=348774 GJE17_RS08520 WP_011185108.1 1731080..1732186(+) (recF) [Streptococcus pyogenes strain AUSMDU00010539]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCGTCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTATTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGTGTGACAAAGATTAATGCGCTGAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTTGCACCAGAAGATTTGCAACTAGTTAAGGGAGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAGCCTGTTTACTTATCTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAACAAATTGATGCCGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTGGCTATGGAGC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCGTTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAGTCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAAAACTAATATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGCGTTGGTCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGGATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTCCACGTGACAAAAGGAACCGTTCAAATTGATTCTGATATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

3D structure

• AlphaFold DB: Q5X9A5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	62.842	99.457	0.625
recF	Bacillus subtilis subsp. subtilis str. 168	45.722	100	0.465