Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | GJE17_RS00675 | Genome accession | NZ_CP045930 |
| Coordinates | 104263..104547 (+) | Length | 94 a.a. |
| NCBI ID | WP_011284422.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain AUSMDU00010539 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 99263..109547
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJE17_RS00650 (GJE17_00650) | - | 101209..101574 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| GJE17_RS00655 (GJE17_00655) | comGA | 101667..102605 (+) | 939 | WP_020904831.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GJE17_RS00660 (GJE17_00660) | comGB | 102541..103575 (+) | 1035 | WP_226316548.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GJE17_RS00665 (GJE17_00665) | comGC | 103577..103903 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GJE17_RS00670 (GJE17_00670) | comGD | 103878..104306 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| GJE17_RS00675 (GJE17_00675) | comGE | 104263..104547 (+) | 285 | WP_011284422.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| GJE17_RS00680 (GJE17_00680) | comGF | 104540..104974 (+) | 435 | WP_020904833.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| GJE17_RS00685 (GJE17_00685) | comGG | 104958..105284 (+) | 327 | WP_002986539.1 | competence type IV pilus minor pilin ComGG | - |
| GJE17_RS00690 (GJE17_00690) | comGH | 105382..106335 (+) | 954 | WP_010921802.1 | class I SAM-dependent methyltransferase | Machinery gene |
| GJE17_RS00695 (GJE17_00695) | - | 106394..107590 (+) | 1197 | WP_020904834.1 | acetate kinase | - |
| GJE17_RS00700 (GJE17_00700) | - | 107777..108085 (+) | 309 | Protein_89 | hypothetical protein | - |
| GJE17_RS00705 (GJE17_00705) | proC | 108168..108938 (-) | 771 | WP_002986527.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10654.59 Da Isoelectric Point: 8.9043
>NTDB_id=348696 GJE17_RS00675 WP_011284422.1 104263..104547(+) (comGE) [Streptococcus pyogenes strain AUSMDU00010539]
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEITLNGCHITILRTDRY
ISIHDDEGEVMKIE
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEITLNGCHITILRTDRY
ISIHDDEGEVMKIE
Nucleotide
Download Length: 285 bp
>NTDB_id=348696 GJE17_RS00675 WP_011284422.1 104263..104547(+) (comGE) [Streptococcus pyogenes strain AUSMDU00010539]
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATTGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATAACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATTGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATAACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
38.298 |
100 |
0.383 |