Detailed information NTG0348546

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: EYC20_RS06860
• Genome accession: NZ_CP036388
• Coordinates: 1432007..1433320 (-)
• Length: 437 a.a.
• NCBI ID: WP_000653638.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 81C9
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1427007..1438320

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EYC20_RS06830	nadC	1427470..1428291 (-)	822	WP_000404078.1	carboxylating nicotinate-nucleotide diphosphorylase	-
EYC20_RS06835	nadA	1428291..1429301 (-)	1011	WP_001141779.1	quinolinate synthase NadA	-
EYC20_RS06840	-	1429291..1430094 (-)	804	WP_000226145.1	phosphatidylserine decarboxylase	-
EYC20_RS06845	-	1430088..1430594 (-)	507	WP_000953089.1	DUF6115 domain-containing protein	-
EYC20_RS06850	-	1430607..1431101 (-)	495	WP_001987744.1	hypothetical protein	-
EYC20_RS06855	mqnP	1431094..1431936 (-)	843	WP_262974773.1	menaquinone biosynthesis prenyltransferase MqnP	-
EYC20_RS06860	comEC/comE3	1432007..1433320 (-)	1314	WP_000653638.1	ComEC/Rec2 family competence protein	Machinery gene
EYC20_RS06865	-	1433317..1434777 (-)	1461	WP_000349780.1	replicative DNA helicase	-
EYC20_RS06870	-	1434788..1436188 (-)	1401	WP_000954078.1	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	-
EYC20_RS06875	crdS	1436191..1437378 (-)	1188	WP_080020215.1	copper-sensing histidine kinase CrdS	-
EYC20_RS06880	crdR	1437359..1438000 (-)	642	WP_001169818.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50007.92 Da
• Isoelectric Point: 9.8515

>NTDB_id=348546 EYC20_RS06860 WP_000653638.1 1432007..1433320(-) (comEC/comE3) [Helicobacter pylori strain 81C9]
MKDKTFQGAFELLTTSKEYLLCGVILSLLLALNLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYATIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHVRHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQTFFKTSSFWVRSFQIISLS
ALVFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLLLHAVGLGSLLDGILNMPLTIPTISVSSPLWLLGVHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=348546 EYC20_RS06860 WP_000653638.1 1432007..1433320(-) (comEC/comE3) [Helicobacter pylori strain 81C9]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCTCCAAAGAATACTTGCTGTGTGGGGTTATTTTAAG
CCTTTTGTTGGCGCTTAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCCAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTATGCCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTTGGCAAAATCAAACCTTGCTC
GTTTTTGGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAAACAAGATTTCAAATCGCATG
TGCGCCATTTCATTGATAGCGCTCATTCAAGCGCTTTAGTGGGTAATTTGTATCGAGCGTTGTTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTTCTTTTTTCGCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTGTTGCTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTTTTAAAACACACTCAAACCTTTTTTAAAACCTCTTCTTTTTGGGTGCGATCTTTTCAGATCATAAGCTTAAGC
GCGCTAGTGTTTTTGAACATGCTCATCATTGCACATGCCTTTTTCCCTATGTTTTCGCCCTACCAACTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTACTCTTGCATGCTGTGGGTTTGGGGTCTTTGTTGGATGGTA
TTTTAAACATGCCTTTAACAATCCCTACAATTTCGGTTTCTTCGCCTTTATGGCTTTTGGGGGTGCATTTATTTTTAACG
ATTTTGAGTGCACGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-387)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	94.966	100	0.95