Detailed information NTG0034850

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HELPY_RS07295
• Genome accession: NC_012973
• Coordinates: 1486968..1488407 (-)
• Length: 479 a.a.
• NCBI ID: WP_000748977.1
• Uniprot ID: -
• Organism: Helicobacter pylori B38
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1481968..1493407

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HELPY_RS07270 (HELPY_1495)	recG	1483100..1484971 (-)	1872	WP_001158375.1	ATP-dependent DNA helicase RecG	-
HELPY_RS07275 (HELPY_1496)	-	1485053..1485400 (+)	348	WP_000837036.1	hypothetical protein	-
HELPY_RS07280 (HELPY_1497)	-	1485404..1486039 (+)	636	WP_000668056.1	outer membrane protein	-
HELPY_RS07285 (HELPY_1498)	-	1486036..1486788 (-)	753	WP_000767541.1	exodeoxyribonuclease III	-
HELPY_RS07295 (HELPY_1499)	comH	1486968..1488407 (-)	1440	WP_000748977.1	hypothetical protein	Machinery gene
HELPY_RS07305 (HELPY_1500)	dnaA	1488636..1490003 (-)	1368	WP_000380606.1	chromosomal replication initiator protein DnaA	-
HELPY_RS07310 (HELPY_1501)	-	1490156..1490698 (+)	543	WP_000922982.1	hypothetical protein	-
HELPY_RS07315 (HELPY_1502)	-	1490741..1490980 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HELPY_RS07320 (HELPY_1503)	glmS	1490981..1492774 (+)	1794	WP_000334448.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54776.57 Da
• Isoelectric Point: 6.3620

>NTDB_id=34850 HELPY_RS07295 WP_000748977.1 1486968..1488407(-) (comH) [Helicobacter pylori B38]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEAHAHQMPSLNAPMQKPQNKPSSSQQSPQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNDTSNADINENNESNENRDNVEKQAIRDANVKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQAEPTFYETNELAYSSTRKSEITQNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVHFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=34850 HELPY_RS07295 WP_000748977.1 1486968..1488407(-) (comH) [Helicobacter pylori B38]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAACTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAAGCGCACGCGCACCAAATGCCTTCTTTAAACGCACCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCCCCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACGACACCTCTAACGCTGATATTA
ATGAAAACAATGAAAGCAATGAGAATAGGGACAATGTGGAAAAACAAGCCATTAGAGATGCTAATGTTAAAGAATTTGCG
TGCGGAAAGTGGGTCTATGACGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCTTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACGATTCTTCAAGCCAGA
AGCTCTACGGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCCAAACAAGACGATC
AAGCAGAGCCGACTTTTTATGAAACCAACGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCAAAACGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCACTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	96.242	100	0.962