Detailed information NTG0034841

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HELPY_RS01670
• Genome accession: NC_012973
• Coordinates: 334057..334857 (+)
• Length: 266 a.a.
• NCBI ID: WP_000835250.1
• Uniprot ID: -
• Organism: Helicobacter pylori B38
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 329057..339857

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HELPY_RS01635 (HELPY_0331)	pseH	329554..330096 (+)	543	WP_000742675.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HELPY_RS01640 (HELPY_0332)	-	330029..330967 (-)	939	WP_000833961.1	tetraacyldisaccharide 4'-kinase	-
HELPY_RS01645 (HELPY_0333)	-	330964..331746 (-)	783	WP_001168296.1	NAD+ synthase	-
HELPY_RS01655 (HELPY_0334)	ilvC	331998..332990 (+)	993	WP_001207790.1	ketol-acid reductoisomerase	-
HELPY_RS01660 (HELPY_0335)	minD	333014..333820 (+)	807	WP_001019028.1	septum site-determining protein MinD	-
HELPY_RS01665 (HELPY_0336)	minE	333817..334050 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
HELPY_RS01670 (HELPY_0337)	dprA	334057..334857 (+)	801	WP_000835250.1	DNA-processing protein DprA	Machinery gene
HELPY_RS01675 (HELPY_0338)	dprB	334854..335258 (+)	405	WP_000599248.1	Holliday junction resolvase RuvX	Machinery gene
HELPY_RS01680 (HELPY_0339)	-	335482..336045 (+)	564	WP_041200496.1	tetratricopeptide repeat protein	-
HELPY_RS01685 (HELPY_0340)	-	336231..336569 (+)	339	WP_000699922.1	hypothetical protein	-
HELPY_RS01690 (HELPY_0341)	-	336553..337113 (+)	561	WP_001035899.1	hypothetical protein	-
HELPY_RS08755	-	337170..337534 (+)	365	Protein_317	glycoside hydrolase family protein	-
HELPY_RS01700 (HELPY_0344)	-	337531..337797 (+)	267	WP_000698055.1	hypothetical protein	-
HELPY_RS01710 (HELPY_0345)	-	338106..338492 (+)	387	WP_000393584.1	DUF1294 domain-containing protein	-
HELPY_RS01715 (HELPY_0346)	-	338492..339277 (+)	786	WP_000119823.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29831.79 Da
• Isoelectric Point: 8.5846

>NTDB_id=34841 HELPY_RS01670 WP_000835250.1 334057..334857(+) (dprA) [Helicobacter pylori B38]
MKSHFQYSTLENIPKAFGILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDVVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=34841 HELPY_RS01670 WP_000835250.1 334057..334857(+) (dprA) [Helicobacter pylori B38]
ATGAAAAGCCATTTCCAATACAGCACGCTAGAAAATATCCCTAAAGCCTTTGGCATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCTAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
TAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GTTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGTAGTGATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAATACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.744	100	0.977
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.788	84.962	0.406