Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   EYB51_RS04950 Genome accession   NZ_CP036356
Coordinates   751043..751477 (-) Length   144 a.a.
NCBI ID   WP_000811502.1    Uniprot ID   A0A5C5ACH0
Organism   Bacillus sp. SYJ     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 746043..756477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EYB51_RS04935 - 747066..747623 (+) 558 WP_087966214.1 PadR family transcriptional regulator -
  EYB51_RS04940 metE 748291..750579 (+) 2289 WP_131100683.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  EYB51_RS04945 comJ 750617..751006 (-) 390 WP_087966210.1 competence protein ComJ -
  EYB51_RS04950 nucA/comI 751043..751477 (-) 435 WP_000811502.1 DNA-entry nuclease Machinery gene
  EYB51_RS04955 - 751714..752463 (+) 750 WP_000388464.1 DUF3967 domain-containing protein -
  EYB51_RS04960 kinB 752517..753791 (-) 1275 WP_000420393.1 sporulation sensor histidine kinase KinB -
  EYB51_RS04965 - 754101..754301 (+) 201 WP_000929285.1 hypothetical protein -
  EYB51_RS04970 - 754425..755582 (+) 1158 WP_087966208.1 aminotransferase A -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16010.38 Da        Isoelectric Point: 8.4331

>NTDB_id=348139 EYB51_RS04950 WP_000811502.1 751043..751477(-) (nucA/comI) [Bacillus sp. SYJ]
MKQLKGIIISIIAILSIVVAVYEVLVPEETSIKKTNAYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFDVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=348139 EYB51_RS04950 WP_000811502.1 751043..751477(-) (nucA/comI) [Bacillus sp. SYJ]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATTGCAATTCTTTCTATTGTAGTAGCGGTTTATGAAGTACTTGTTCC
AGAGGAAACAAGTATTAAAAAAACAAATGCATATGATCAAGTTCTAGAATTTCCGAAAGAGCGATATCCAGAGACAGGGA
AACATATTACGGATGCTATAAAAGAAGGACATTCGGAAGTGTGTACAATCGACCGTGGTGGTGCTGCGGATAGAAGAAAA
TTATCGTTAGCTCCATACCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGCGGAAA
AGGAGCACACATTGAATATATAAGTCCAGCAGATAACCGTGGAGCAGGGTCTTGGGTAGGAAATAAGCTAGATAAATACC
CGGATGGTACGCGTGTGAAATTTGACGTAAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5C5ACH0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

71.171

77.083

0.549

Multiple sequence alignment