Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EYB51_RS04905 Genome accession   NZ_CP036356
Coordinates   741627..742085 (+) Length   152 a.a.
NCBI ID   WP_000804871.1    Uniprot ID   A0A516QVQ1
Organism   Bacillus sp. SYJ     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 736627..747085
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EYB51_RS04885 - 737287..737523 (+) 237 WP_087966225.1 hypothetical protein -
  EYB51_RS04895 - 737697..739805 (-) 2109 WP_087966223.1 polyphosphate kinase -
  EYB51_RS04900 ppx 739914..741449 (-) 1536 WP_087966221.1 exopolyphosphatase -
  EYB51_RS04905 kre 741627..742085 (+) 459 WP_000804871.1 YkyB family protein Regulator
  EYB51_RS04910 - 742117..742779 (-) 663 WP_000922488.1 YkyA family protein -
  EYB51_RS04915 - 743434..744075 (-) 642 WP_087966219.1 diguanylate cyclase -
  EYB51_RS04920 - 744240..744473 (+) 234 WP_033691462.1 SPP1 phage holin family protein -
  EYB51_RS04925 - 744505..745005 (-) 501 WP_087966217.1 hypothetical protein -
  EYB51_RS04930 - 745433..746974 (+) 1542 WP_087966216.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17773.49 Da        Isoelectric Point: 10.6793

>NTDB_id=348138 EYB51_RS04905 WP_000804871.1 741627..742085(+) (kre) [Bacillus sp. SYJ]
MKPSQPQSQLQNQHSINRLAQSVFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=348138 EYB51_RS04905 WP_000804871.1 741627..742085(+) (kre) [Bacillus sp. SYJ]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTGTTTTCGTTGTGAA
TCGCCATGCTAAAGCTGCAACTAATCCGAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAACCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A516QVQ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

65.517

76.316

0.5

Multiple sequence alignment