Detailed information NTG0348109

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GIJ02_RS00940
• Genome accession: NZ_CP045827
• Coordinates: 199261..200244 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain AUSMDU00014361
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 194261..205244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GIJ02_RS00925 (GIJ02_00925)	dppA	195561..197168 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
GIJ02_RS00930 (GIJ02_00930)	dppB	197319..198338 (+)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
GIJ02_RS00935 (GIJ02_00935)	dppC	198348..199250 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
GIJ02_RS00940 (GIJ02_00940)	amiE	199261..200244 (+)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
GIJ02_RS00945 (GIJ02_00945)	dppF	200241..201245 (+)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GIJ02_RS00950 (GIJ02_00950)	yhjV	201275..202546 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
GIJ02_RS00955 (GIJ02_00955)	-	203022..203129 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GIJ02_RS00960 (GIJ02_00960)	-	203505..203612 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GIJ02_RS00965 (GIJ02_00965)	-	203988..204095 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GIJ02_RS00970 (GIJ02_00970)	-	204471..204578 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=348109 GIJ02_RS00940 WP_001196495.1 199261..200244(+) (amiE) [Escherichia coli strain AUSMDU00014361]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=348109 GIJ02_RS00940 WP_001196495.1 199261..200244(+) (amiE) [Escherichia coli strain AUSMDU00014361]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401