Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EUC41_RS19995 | Genome accession | NZ_CP036344 |
| Coordinates | 4243372..4243884 (+) | Length | 170 a.a. |
| NCBI ID | WP_062680943.1 | Uniprot ID | A0A6J5B160 |
| Organism | Achromobacter denitrificans strain TB | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4238372..4248884
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EUC41_RS19985 (EUC41_19870) | uvrA | 4238824..4241709 (-) | 2886 | WP_174717261.1 | excinuclease ABC subunit UvrA | - |
| EUC41_RS19990 (EUC41_19875) | - | 4241887..4243071 (+) | 1185 | WP_174717262.1 | MFS transporter | - |
| EUC41_RS19995 (EUC41_19880) | ssb | 4243372..4243884 (+) | 513 | WP_062680943.1 | single-stranded DNA-binding protein | Machinery gene |
| EUC41_RS20000 (EUC41_19885) | - | 4244060..4244539 (+) | 480 | WP_125283145.1 | hypothetical protein | - |
| EUC41_RS20005 (EUC41_19890) | - | 4244550..4246262 (+) | 1713 | WP_125283144.1 | hypothetical protein | - |
| EUC41_RS20010 | - | 4246273..4246467 (+) | 195 | WP_174717263.1 | hypothetical protein | - |
| EUC41_RS20015 (EUC41_19900) | - | 4246464..4247045 (+) | 582 | WP_123786456.1 | hypothetical protein | - |
| EUC41_RS20020 (EUC41_19905) | - | 4247055..4248605 (+) | 1551 | WP_062680952.1 | AAA family ATPase | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18377.39 Da Isoelectric Point: 5.9656
>NTDB_id=348089 EUC41_RS19995 WP_062680943.1 4243372..4243884(+) (ssb) [Achromobacter denitrificans strain TB]
MASVNKVILVGNLGRDPEVRYSPDGAAICNMSIATTSTWKDKASGERREETEWHRVVMYNRLAEIAGEYLKKGRSVYIEG
RLKTRKWQDKDTGADRYSTEIVADQMQMLGGREDGGGGGASYGGGGGYDDAPRQQRAPAQRPAPQQRPAPAAAPASSGAN
LADMDDDIPF
MASVNKVILVGNLGRDPEVRYSPDGAAICNMSIATTSTWKDKASGERREETEWHRVVMYNRLAEIAGEYLKKGRSVYIEG
RLKTRKWQDKDTGADRYSTEIVADQMQMLGGREDGGGGGASYGGGGGYDDAPRQQRAPAQRPAPQQRPAPAAAPASSGAN
LADMDDDIPF
Nucleotide
Download Length: 513 bp
>NTDB_id=348089 EUC41_RS19995 WP_062680943.1 4243372..4243884(+) (ssb) [Achromobacter denitrificans strain TB]
ATGGCATCGGTTAACAAAGTCATACTCGTGGGCAATCTGGGACGCGACCCGGAAGTCCGCTACAGCCCCGACGGGGCGGC
AATCTGCAATATGTCCATTGCCACCACCTCCACCTGGAAAGACAAGGCGTCGGGCGAACGCCGCGAAGAAACGGAATGGC
ACCGCGTCGTCATGTACAACCGCCTGGCCGAAATCGCCGGCGAATACCTGAAGAAGGGCCGTTCGGTCTACATCGAAGGC
CGCCTGAAGACGCGCAAGTGGCAAGACAAGGACACCGGCGCTGACCGCTACAGCACTGAAATCGTCGCCGACCAGATGCA
GATGCTGGGCGGCCGCGAAGACGGCGGCGGCGGTGGCGCCAGCTACGGTGGCGGCGGCGGCTACGACGACGCGCCGCGCC
AGCAGCGCGCGCCGGCGCAGCGCCCGGCGCCCCAGCAGCGCCCGGCTCCCGCGGCGGCTCCGGCCAGCAGCGGCGCCAAC
CTGGCGGACATGGACGACGACATTCCGTTCTGA
ATGGCATCGGTTAACAAAGTCATACTCGTGGGCAATCTGGGACGCGACCCGGAAGTCCGCTACAGCCCCGACGGGGCGGC
AATCTGCAATATGTCCATTGCCACCACCTCCACCTGGAAAGACAAGGCGTCGGGCGAACGCCGCGAAGAAACGGAATGGC
ACCGCGTCGTCATGTACAACCGCCTGGCCGAAATCGCCGGCGAATACCTGAAGAAGGGCCGTTCGGTCTACATCGAAGGC
CGCCTGAAGACGCGCAAGTGGCAAGACAAGGACACCGGCGCTGACCGCTACAGCACTGAAATCGTCGCCGACCAGATGCA
GATGCTGGGCGGCCGCGAAGACGGCGGCGGCGGTGGCGCCAGCTACGGTGGCGGCGGCGGCTACGACGACGCGCCGCGCC
AGCAGCGCGCGCCGGCGCAGCGCCCGGCGCCCCAGCAGCGCCCGGCTCCCGCGGCGGCTCCGGCCAGCAGCGGCGCCAAC
CTGGCGGACATGGACGACGACATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
54.645 |
100 |
0.588 |
| ssb | Neisseria gonorrhoeae MS11 |
52.198 |
100 |
0.559 |
| ssb | Glaesserella parasuis strain SC1401 |
50 |
100 |
0.547 |
| ssb | Neisseria meningitidis MC58 |
51.381 |
100 |
0.547 |