Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   GII76_RS10205 Genome accession   NZ_CP045826
Coordinates   2015813..2017816 (+) Length   667 a.a.
NCBI ID   WP_153939997.1    Uniprot ID   -
Organism   Bacillus subtilis strain 73     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2010813..2022816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII76_RS10170 (GII76_10170) pghL 2011178..2011936 (+) 759 WP_015714006.1 gamma-polyglutamate hydrolase PghL -
  GII76_RS10175 (GII76_10175) - 2011963..2012412 (-) 450 WP_003245454.1 YndM family protein -
  GII76_RS10180 (GII76_10180) fosM 2012620..2013054 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  GII76_RS21820 - 2012963..2013239 (+) 277 Protein_1970 hypothetical protein -
  GII76_RS10185 (GII76_10185) dinR/lexA 2013591..2014208 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  GII76_RS10190 (GII76_10190) yneA 2014358..2014675 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  GII76_RS10195 (GII76_10195) dinL 2014694..2015347 (+) 654 WP_015714011.1 recombinase family protein -
  GII76_RS10200 (GII76_10200) ynzC 2015411..2015644 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  GII76_RS10205 (GII76_10205) recP/tkt 2015813..2017816 (+) 2004 WP_153939997.1 transketolase Machinery gene
  GII76_RS10210 (GII76_10210) sirA 2017969..2018415 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  GII76_RS10215 (GII76_10215) yneF 2018501..2018719 (+) 219 WP_003221221.1 YneF family protein -
  GII76_RS10220 (GII76_10220) ynzD 2018793..2018966 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  GII76_RS10225 (GII76_10225) ccdA 2019186..2019893 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  GII76_RS10230 (GII76_10230) yneI 2019982..2020344 (+) 363 WP_003245707.1 response regulator -
  GII76_RS10235 (GII76_10235) yneJ 2020423..2020914 (+) 492 WP_010886519.1 CcdC family protein -
  GII76_RS10240 (GII76_10240) yneK 2020945..2021373 (-) 429 WP_003231580.1 DynA interaction protein YneK -
  GII76_RS10245 (GII76_10245) cotM 2021607..2021999 (-) 393 WP_072174018.1 outer spore coat protein CotM -
  GII76_RS10250 (GII76_10250) sspP 2022079..2022225 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  GII76_RS10255 (GII76_10255) sspO 2022257..2022403 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72299.40 Da        Isoelectric Point: 4.7595

>NTDB_id=348029 GII76_RS10205 WP_153939997.1 2015813..2017816(+) (recP/tkt) [Bacillus subtilis strain 73]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVENGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTAEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=348029 GII76_RS10205 WP_153939997.1 2015813..2017816(+) (recP/tkt) [Bacillus subtilis strain 73]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCTGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATTGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGAATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCAAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACAGCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCCTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCTGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.495

99.25

0.561