Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   EKN58_RS14325 Genome accession   NZ_CP036310
Coordinates   2897724..2898350 (-) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain WCHEH090011     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 2892724..2903350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EKN58_RS14310 (EKN58_014310) helD 2892963..2895017 (-) 2055 WP_032608969.1 DNA helicase IV -
  EKN58_RS14315 (EKN58_014315) - 2895140..2895586 (+) 447 WP_003858149.1 YccF domain-containing protein -
  EKN58_RS14320 (EKN58_014320) yccS 2895605..2897767 (+) 2163 WP_032608968.1 YccS family putative transporter -
  EKN58_RS14325 (EKN58_014325) sxy/tfoX 2897724..2898350 (-) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  EKN58_RS14330 (EKN58_014330) sulA 2898568..2899077 (+) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  EKN58_RS14335 (EKN58_014335) ompA 2899434..2900486 (+) 1053 WP_017694761.1 porin OmpA -
  EKN58_RS14340 (EKN58_014340) matP 2900552..2901004 (-) 453 WP_003858158.1 macrodomain Ter protein MatP -
  EKN58_RS14345 (EKN58_014345) - 2901191..2902951 (+) 1761 WP_032608967.1 Lon protease family protein -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=347991 EKN58_RS14325 WP_023315767.1 2897724..2898350(-) (sxy/tfoX) [Enterobacter hormaechei strain WCHEH090011]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=347991 EKN58_RS14325 WP_023315767.1 2897724..2898350(-) (sxy/tfoX) [Enterobacter hormaechei strain WCHEH090011]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572


Multiple sequence alignment