Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   GII77_RS21080 Genome accession   NZ_CP045825
Coordinates   4092273..4093067 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain 75     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4087273..4098067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII77_RS21055 (GII77_21055) - 4088387..4089070 (-) 684 WP_048654834.1 response regulator transcription factor -
  GII77_RS21060 (GII77_21060) - 4089282..4090181 (+) 900 WP_015250814.1 PepSY domain-containing protein -
  GII77_RS21065 (GII77_21065) - 4090342..4090842 (+) 501 WP_015250813.1 PepSY domain-containing protein -
  GII77_RS21070 (GII77_21070) - 4090839..4090968 (-) 130 Protein_4130 hypothetical protein -
  GII77_RS21075 (GII77_21075) htrA 4090989..4092191 (-) 1203 WP_015250812.1 serine protease HtrC Regulator
  GII77_RS21080 (GII77_21080) vicX 4092273..4093067 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  GII77_RS21085 (GII77_21085) walI 4093089..4093931 (-) 843 WP_015250811.1 WalRK two-component regulatory system regulator WalI -
  GII77_RS21090 (GII77_21090) walH 4093918..4095285 (-) 1368 WP_015250810.1 WalRK two-component regulatory system regulator WalH -
  GII77_RS21095 (GII77_21095) walK 4095275..4097110 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  GII77_RS21100 (GII77_21100) walR 4097118..4097825 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=347947 GII77_RS21080 WP_003226939.1 4092273..4093067(-) (vicX) [Bacillus subtilis strain 75]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=347947 GII77_RS21080 WP_003226939.1 4092273..4093067(-) (vicX) [Bacillus subtilis strain 75]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGTGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTACAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCAAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53

Multiple sequence alignment