Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GII77_RS20710 Genome accession   NZ_CP045825
Coordinates   4015814..4016503 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain 75     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4010814..4021503
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII77_RS20690 (GII77_20690) yxeA 4011719..4012066 (-) 348 WP_003227084.1 YxeA family protein -
  GII77_RS20695 (GII77_20695) yxdM 4012080..4013948 (-) 1869 WP_015250856.1 ABC transporter permease YxdM -
  GII77_RS20700 (GII77_20700) yxdL 4013923..4014696 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  GII77_RS20705 (GII77_20705) yxdK 4014840..4015817 (-) 978 WP_015250855.1 two-component system sensor histidine kinase YxdK -
  GII77_RS20710 (GII77_20710) braR 4015814..4016503 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  GII77_RS20715 (GII77_20715) iolJ 4016612..4017484 (-) 873 WP_015250854.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  GII77_RS20720 (GII77_20720) iolI 4017505..4018341 (-) 837 WP_015250853.1 2-keto-myo-inositol isomerase -
  GII77_RS20725 (GII77_20725) iolH 4018427..4019296 (-) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  GII77_RS20730 (GII77_20730) iolG 4019316..4020350 (-) 1035 WP_015250851.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=347944 GII77_RS20710 WP_003243527.1 4015814..4016503(-) (braR) [Bacillus subtilis strain 75]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=347944 GII77_RS20710 WP_003243527.1 4015814..4016503(-) (braR) [Bacillus subtilis strain 75]
TTGAATAAAATTATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGAGAAATGGATCAGGTGATGGCGATTGAAAACGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTGGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAACTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406