Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GII77_RS18110 Genome accession   NZ_CP045825
Coordinates   3497199..3497912 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain 75     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3492199..3502912
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII77_RS18090 (GII77_18090) ghrB 3492343..3493320 (+) 978 WP_015251153.1 D-glycerate dehydrogenase -
  GII77_RS18095 (GII77_18095) psdB 3493358..3495298 (-) 1941 WP_015251152.1 lantibiotic ABC transporter permease PsdB -
  GII77_RS18100 (GII77_18100) psdA 3495273..3496052 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  GII77_RS18105 (GII77_18105) psdS 3496135..3497205 (-) 1071 WP_015251151.1 two-component sensor histidine kinase PsdS -
  GII77_RS18110 (GII77_18110) braR 3497199..3497912 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  GII77_RS18115 (GII77_18115) - 3498059..3498268 (+) 210 WP_029318346.1 hypothetical protein -
  GII77_RS18120 (GII77_18120) yvcN 3498304..3499068 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  GII77_RS18125 (GII77_18125) crh 3499069..3499326 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  GII77_RS18130 (GII77_18130) whiA 3499350..3500300 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  GII77_RS18135 (GII77_18135) mgfK 3500323..3501276 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  GII77_RS18140 (GII77_18140) rapZ 3501278..3502165 (-) 888 WP_003243903.1 RNase adapter RapZ -
  GII77_RS18145 (GII77_18145) rppI 3502190..3502666 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=347929 GII77_RS18110 WP_003244535.1 3497199..3497912(-) (braR) [Bacillus subtilis strain 75]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=347929 GII77_RS18110 WP_003244535.1 3497199..3497912(-) (braR) [Bacillus subtilis strain 75]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43