Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   GII78_RS21705 Genome accession   NZ_CP045824
Coordinates   4164655..4165449 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain MB8_B10     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4159655..4170449
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII78_RS21680 (GII78_21680) - 4160769..4161452 (-) 684 WP_024573086.1 response regulator transcription factor -
  GII78_RS21685 (GII78_21685) - 4161664..4162563 (+) 900 WP_029318544.1 PepSY domain-containing protein -
  GII78_RS21690 (GII78_21690) - 4162724..4163224 (+) 501 WP_029318543.1 PepSY domain-containing protein -
  GII78_RS21695 (GII78_21695) - 4163221..4163351 (-) 131 Protein_4253 hypothetical protein -
  GII78_RS21700 (GII78_21700) htrA 4163371..4164573 (-) 1203 WP_009969578.1 serine protease HtrC Regulator
  GII78_RS21705 (GII78_21705) vicX 4164655..4165449 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  GII78_RS21710 (GII78_21710) walI 4165471..4166313 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  GII78_RS21715 (GII78_21715) walH 4166300..4167667 (-) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  GII78_RS21720 (GII78_21720) walK 4167657..4169492 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  GII78_RS21725 (GII78_21725) walR 4169500..4170207 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=347796 GII78_RS21705 WP_003242676.1 4164655..4165449(-) (vicX) [Bacillus subtilis strain MB8_B10]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=347796 GII78_RS21705 WP_003242676.1 4164655..4165449(-) (vicX) [Bacillus subtilis strain MB8_B10]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53