Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GII78_RS18700 Genome accession   NZ_CP045824
Coordinates   3574193..3574906 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain MB8_B10     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3569193..3579906
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII78_RS18680 (GII78_18680) ghrB 3569337..3570314 (+) 978 WP_015251153.1 D-glycerate dehydrogenase -
  GII78_RS18685 (GII78_18685) psdB 3570352..3572292 (-) 1941 WP_029725972.1 lantibiotic ABC transporter permease PsdB -
  GII78_RS18690 (GII78_18690) psdA 3572267..3573046 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  GII78_RS18695 (GII78_18695) psdS 3573129..3574199 (-) 1071 WP_029725973.1 two-component sensor histidine kinase PsdS -
  GII78_RS18700 (GII78_18700) braR 3574193..3574906 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  GII78_RS18705 (GII78_18705) yvzJ 3575053..3575262 (+) 210 WP_003243327.1 lipoprotein -
  GII78_RS18710 (GII78_18710) yvcN 3575298..3576062 (-) 765 WP_072692779.1 arylamine N-acetyltransferase -
  GII78_RS18715 (GII78_18715) crh 3576063..3576320 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  GII78_RS18720 (GII78_18720) whiA 3576344..3577294 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  GII78_RS18725 (GII78_18725) mgfK 3577317..3578270 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  GII78_RS18730 (GII78_18730) rapZ 3578272..3579159 (-) 888 WP_003243903.1 RNase adapter RapZ -
  GII78_RS18735 (GII78_18735) rppI 3579184..3579660 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=347778 GII78_RS18700 WP_003244535.1 3574193..3574906(-) (braR) [Bacillus subtilis strain MB8_B10]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=347778 GII78_RS18700 WP_003244535.1 3574193..3574906(-) (braR) [Bacillus subtilis strain MB8_B10]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAACCGTTCCATTTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCGTCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43