Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GII78_RS16365 Genome accession   NZ_CP045824
Coordinates   3121707..3122402 (-) Length   231 a.a.
NCBI ID   WP_029318284.1    Uniprot ID   -
Organism   Bacillus subtilis strain MB8_B10     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3116707..3127402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII78_RS16345 (GII78_16345) yttA 3117134..3117880 (+) 747 WP_014480618.1 LMBR1 domain-containing protein -
  GII78_RS16350 (GII78_16350) bceB 3117917..3119857 (-) 1941 WP_029318283.1 bacitracin ABC transporter permease BceB -
  GII78_RS16355 (GII78_16355) bceA 3119847..3120608 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  GII78_RS16360 (GII78_16360) bceS 3120710..3121714 (-) 1005 WP_024573099.1 two-component sensor histidine kinase BceS -
  GII78_RS16365 (GII78_16365) braR 3121707..3122402 (-) 696 WP_029318284.1 two-component response regulator BceR Regulator
  GII78_RS16370 (GII78_16370) ytrF 3122499..3123809 (-) 1311 WP_029318285.1 ABC transporter permease YtrF -
  GII78_RS16375 (GII78_16375) ytrE 3123799..3124494 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  GII78_RS16380 (GII78_16380) - 3124509..3125486 (-) 978 WP_029318286.1 ABC transporter permease -
  GII78_RS16385 (GII78_16385) ytrC 3125516..3126502 (-) 987 WP_029318287.1 ABC transporter permease YtrC -
  GII78_RS16390 (GII78_16390) ytrB 3126496..3127374 (-) 879 WP_029318288.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26896.83 Da        Isoelectric Point: 5.3731

>NTDB_id=347767 GII78_RS16365 WP_029318284.1 3121707..3122402(-) (braR) [Bacillus subtilis strain MB8_B10]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNMEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=347767 GII78_RS16365 WP_029318284.1 3121707..3122402(-) (braR) [Bacillus subtilis strain MB8_B10]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATATGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTTTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377