Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | GII78_RS13945 | Genome accession | NZ_CP045824 |
| Coordinates | 2662019..2663146 (+) | Length | 375 a.a. |
| NCBI ID | WP_015714307.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain MB8_B10 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2657019..2668146
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GII78_RS13915 (GII78_13915) | - | 2657680..2658273 (-) | 594 | WP_015714302.1 | TetR/AcrR family transcriptional regulator | - |
| GII78_RS13920 (GII78_13920) | - | 2658431..2659426 (+) | 996 | WP_015714303.1 | acryloyl-CoA reductase | - |
| GII78_RS13925 (GII78_13925) | - | 2659709..2659849 (+) | 141 | WP_231940260.1 | DUF255 domain-containing protein | - |
| GII78_RS13930 (GII78_13930) | - | 2659957..2660571 (-) | 615 | WP_153912481.1 | hypothetical protein | - |
| GII78_RS13935 (GII78_13935) | - | 2660622..2660969 (-) | 348 | WP_015714305.1 | S-Ena type endospore appendage | - |
| GII78_RS13940 (GII78_13940) | - | 2661046..2661711 (-) | 666 | WP_015714306.1 | CotZ-related putative spore coat protein | - |
| GII78_RS13945 (GII78_13945) | rapC | 2662019..2663146 (+) | 1128 | WP_015714307.1 | response regulator aspartate phosphatase RapE | Regulator |
| GII78_RS13950 (GII78_13950) | phrE | 2663136..2663270 (+) | 135 | WP_014114495.1 | phosphatase RapE inhibitor PhrE | - |
| GII78_RS13955 (GII78_13955) | - | 2663380..2663539 (+) | 160 | Protein_2725 | hypothetical protein | - |
| GII78_RS13960 (GII78_13960) | yqcG | 2663909..2665504 (+) | 1596 | WP_015714309.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| GII78_RS13965 (GII78_13965) | yqcF | 2665519..2666097 (+) | 579 | WP_015714310.1 | type VII secretion system immunity protein YqcF | - |
| GII78_RS13970 (GII78_13970) | - | 2666215..2666361 (+) | 147 | WP_009967791.1 | hypothetical protein | - |
| GII78_RS13975 (GII78_13975) | - | 2666358..2666720 (-) | 363 | WP_003229947.1 | hypothetical protein | - |
| GII78_RS13980 (GII78_13980) | - | 2666736..2667215 (-) | 480 | WP_004399085.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 44640.47 Da Isoelectric Point: 7.5547
>NTDB_id=347749 GII78_RS13945 WP_015714307.1 2662019..2663146(+) (rapC) [Bacillus subtilis strain MB8_B10]
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTMPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTMPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
Nucleotide
Download Length: 1128 bp
>NTDB_id=347749 GII78_RS13945 WP_015714307.1 2662019..2663146(+) (rapC) [Bacillus subtilis strain MB8_B10]
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTTACTGA
TGCTGAAATGTTAAAAGCTGAAATCGAACGTGATATAGAGGTTATGGAAGAAGATCAAGATTTGCTTATTTATTATCAAT
TAATGGCCTTCCGCCATAAAATCATGTTGGAATACACGATGCCATCCGATGAAAACCGAATGGAACTTTCAGAATATTTA
AAGAAAATCGAAGGGCATAAGAAGAAGCTAGACAATATGCGGGCATATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCTACAATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAACTGTCTGAAGTCTATTATCATATGAAAATGACACACATTTCGATGCATTACGCTGAG
CTTTCATATAACATCTATAAAAAACACGAGCTTTATTCTGTTCGGCGTATACAGTGCCATTTTGTCATTGCCGGTAACTA
TGATGACCTTGAAAATCATGAGAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCATATCTATGCCACTGCGTTTTTCAATCTCGGCAATTGTTATCACAAAATGGACAACTTAAATAAGGCTGCTCGT
TACATCGAACAAGCCTTGGTTCAATACAGAAAAATTAACTCTGACGTACTTCCGCAAGCTTATCATGACCTAGCATTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATTAGAAGTGCTGTAGATTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTCCTCAACATTTTT
TCTCGTTTAGAGAACGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTTACTGA
TGCTGAAATGTTAAAAGCTGAAATCGAACGTGATATAGAGGTTATGGAAGAAGATCAAGATTTGCTTATTTATTATCAAT
TAATGGCCTTCCGCCATAAAATCATGTTGGAATACACGATGCCATCCGATGAAAACCGAATGGAACTTTCAGAATATTTA
AAGAAAATCGAAGGGCATAAGAAGAAGCTAGACAATATGCGGGCATATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCTACAATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAACTGTCTGAAGTCTATTATCATATGAAAATGACACACATTTCGATGCATTACGCTGAG
CTTTCATATAACATCTATAAAAAACACGAGCTTTATTCTGTTCGGCGTATACAGTGCCATTTTGTCATTGCCGGTAACTA
TGATGACCTTGAAAATCATGAGAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCATATCTATGCCACTGCGTTTTTCAATCTCGGCAATTGTTATCACAAAATGGACAACTTAAATAAGGCTGCTCGT
TACATCGAACAAGCCTTGGTTCAATACAGAAAAATTAACTCTGACGTACTTCCGCAAGCTTATCATGACCTAGCATTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATTAGAAGTGCTGTAGATTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTCCTCAACATTTTT
TCTCGTTTAGAGAACGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.897 |
100 |
0.413 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
38.196 |
100 |
0.384 |