Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EYC56_RS16900 Genome accession   NZ_CP036255
Coordinates   3570096..3570497 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas oryzae strain BB151-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3565096..3575497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EYC56_RS16885 (EYC56_16885) - 3567110..3569146 (-) 2037 WP_131075517.1 methyl-accepting chemotaxis protein -
  EYC56_RS16890 (EYC56_16890) - 3569186..3569716 (-) 531 WP_053502995.1 chemotaxis protein CheW -
  EYC56_RS16895 (EYC56_16895) - 3569716..3570078 (-) 363 WP_014504132.1 response regulator -
  EYC56_RS16900 (EYC56_16900) pilG 3570096..3570497 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  EYC56_RS16905 (EYC56_16905) gshB 3570734..3571684 (+) 951 WP_131085062.1 glutathione synthase -
  EYC56_RS16910 (EYC56_16910) - 3571681..3572556 (+) 876 WP_053502997.1 energy transducer TonB -
  EYC56_RS16915 (EYC56_16915) - 3572847..3573762 (-) 916 Protein_3060 ADP-ribosylglycohydrolase family protein -
  EYC56_RS16920 (EYC56_16920) tsaB 3573759..3574478 (-) 720 WP_131075518.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=347705 EYC56_RS16900 WP_005913706.1 3570096..3570497(-) (pilG) [Xanthomonas oryzae strain BB151-3]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=347705 EYC56_RS16900 WP_005913706.1 3570096..3570497(-) (pilG) [Xanthomonas oryzae strain BB151-3]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTTGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTAATCATGTTGTCGTCCAAGGATGGGCTGTTCGACAAGGCCCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTATTGAGCGCAATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment