Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EYC54_RS07160 Genome accession   NZ_CP036252
Coordinates   1495780..1496181 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas oryzae strain NJ611     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1490780..1501181
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EYC54_RS07140 (EYC54_07140) tsaB 1491799..1492518 (+) 720 WP_131075518.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  EYC54_RS07145 (EYC54_07145) - 1492515..1493430 (+) 916 Protein_1296 ADP-ribosylglycohydrolase family protein -
  EYC54_RS07150 (EYC54_07150) - 1493721..1494596 (-) 876 WP_053502997.1 energy transducer TonB -
  EYC54_RS07155 (EYC54_07155) gshB 1494593..1495543 (-) 951 WP_053502996.1 glutathione synthase -
  EYC54_RS07160 (EYC54_07160) pilG 1495780..1496181 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  EYC54_RS07165 (EYC54_07165) - 1496199..1496561 (+) 363 WP_014504132.1 response regulator -
  EYC54_RS07170 (EYC54_07170) - 1496561..1497091 (+) 531 WP_003482487.1 chemotaxis protein CheW -
  EYC54_RS07175 (EYC54_07175) - 1497131..1499167 (+) 2037 WP_131075517.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=347652 EYC54_RS07160 WP_005913706.1 1495780..1496181(+) (pilG) [Xanthomonas oryzae strain NJ611]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=347652 EYC54_RS07160 WP_005913706.1 1495780..1496181(+) (pilG) [Xanthomonas oryzae strain NJ611]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTTGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTAATCATGTTGTCGTCCAAGGATGGGCTGTTCGACAAGGCCCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTATTGAGCGCAATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment