Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EYR27_RS11835 Genome accession   NZ_CP036251
Coordinates   2603445..2603846 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas oryzae strain X11-5A     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2598445..2608846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EYR27_RS11820 (EYR27_11820) - 2600459..2602495 (-) 2037 WP_019301400.1 methyl-accepting chemotaxis protein -
  EYR27_RS11825 (EYR27_11825) - 2602535..2603065 (-) 531 WP_003482487.1 chemotaxis protein CheW -
  EYR27_RS11830 (EYR27_11830) - 2603065..2603427 (-) 363 WP_019302454.1 response regulator -
  EYR27_RS11835 (EYR27_11835) pilG 2603445..2603846 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  EYR27_RS11840 (EYR27_11840) gshB 2604082..2605032 (+) 951 WP_019302456.1 glutathione synthase -
  EYR27_RS11845 (EYR27_11845) - 2605029..2605904 (+) 876 WP_019302457.1 energy transducer TonB -
  EYR27_RS11850 (EYR27_11850) - 2606198..2607112 (-) 915 Protein_2142 ADP-ribosylglycohydrolase family protein -
  EYR27_RS11855 (EYR27_11855) tsaB 2607109..2607828 (-) 720 WP_019302458.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=347632 EYR27_RS11835 WP_005913706.1 2603445..2603846(-) (pilG) [Xanthomonas oryzae strain X11-5A]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=347632 EYR27_RS11835 WP_005913706.1 2603445..2603846(-) (pilG) [Xanthomonas oryzae strain X11-5A]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAGATTG
CGGACCAGCAACCTCAGATCATTTTTGTTGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTAATCATGCTGTCGTCCAAGGATGGGCTGTTCGACAAGGCTCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACGCGTGAAGAACTATTGAGCGCAATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment