Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   GII79_RS17105 Genome accession   NZ_CP045823
Coordinates   3258763..3259623 (-) Length   286 a.a.
NCBI ID   WP_040081966.1    Uniprot ID   C0JBM1
Organism   Bacillus subtilis strain MB8_B1     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3253763..3264623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII79_RS17070 (GII79_17070) mrpE 3253999..3254475 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  GII79_RS17075 (GII79_17075) mrpF 3254475..3254759 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  GII79_RS17080 (GII79_17080) mnhG 3254743..3255117 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  GII79_RS17085 (GII79_17085) yuxO 3255158..3255538 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  GII79_RS17090 (GII79_17090) comA 3255557..3256201 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  GII79_RS17095 (GII79_17095) comP 3256282..3258579 (-) 2298 WP_153912412.1 histidine kinase Regulator
  GII79_RS17100 (GII79_17100) comX 3258587..3258748 (-) 162 WP_049140565.1 competence pheromone ComX -
  GII79_RS17105 (GII79_17105) comQ 3258763..3259623 (-) 861 WP_040081966.1 polyprenyl synthetase family protein Regulator
  GII79_RS17110 (GII79_17110) degQ 3259808..3259948 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  GII79_RS17115 (GII79_17115) - 3260170..3260295 (+) 126 WP_003228793.1 hypothetical protein -
  GII79_RS17120 (GII79_17120) - 3260411..3260779 (+) 369 WP_119899729.1 hypothetical protein -
  GII79_RS17125 (GII79_17125) pdeH 3260755..3261984 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -
  GII79_RS17130 (GII79_17130) pncB 3262121..3263593 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  GII79_RS17135 (GII79_17135) pncA 3263609..3264160 (-) 552 WP_088326850.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 286 a.a.        Molecular weight: 32484.39 Da        Isoelectric Point: 4.7419

>NTDB_id=347617 GII79_RS17105 WP_040081966.1 3258763..3259623(-) (comQ) [Bacillus subtilis strain MB8_B1]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFSQEILNFALQSIQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIISQIDNDYKGLFYLNNDFVQKKNTLAYLYLKKQFNDASAELLSLYQKPEEFVSINTKALK
RKLTEAGVIQYLLVMKHLSLQKIKNEMSQLKLGEDKTEKLLSVMIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=347617 GII79_RS17105 WP_040081966.1 3258763..3259623(-) (comQ) [Bacillus subtilis strain MB8_B1]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATGGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTTCACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGCGC
CGCAAACTGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCTTGTGTAATGGGAGTA
ATGTTGGCAACAGGCAAATATCATCCCATCGTAGCTTCTTATTCTTATGAACTTGGGATTATTTCACAGATCGATAATGA
TTATAAAGGTTTGTTTTACTTAAATAACGATTTTGTTCAGAAAAAAAATACATTGGCATACTTATACTTAAAGAAACAAT
TTAACGATGCTTCAGCGGAGCTACTAAGTTTATATCAAAAACCAGAGGAATTTGTTTCAATTAATACTAAGGCTTTGAAG
CGAAAATTGACAGAAGCAGGCGTTATACAATATTTACTGGTGATGAAACATTTATCTCTCCAAAAAATAAAAAATGAAAT
GTCACAATTAAAACTAGGAGAAGATAAAACTGAAAAATTATTGTCTGTTATGATTAAATAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(40-229)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0JBM1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.84

98.252

0.441