Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GII79_RS16290 Genome accession   NZ_CP045823
Coordinates   3115897..3116592 (-) Length   231 a.a.
NCBI ID   WP_003229133.1    Uniprot ID   -
Organism   Bacillus subtilis strain MB8_B1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3110897..3121592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII79_RS16270 (GII79_16270) yttA 3111324..3112070 (+) 747 WP_014480618.1 LMBR1 domain-containing protein -
  GII79_RS16275 (GII79_16275) bceB 3112107..3114047 (-) 1941 WP_046663905.1 bacitracin ABC transporter permease BceB -
  GII79_RS16280 (GII79_16280) bceA 3114037..3114798 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  GII79_RS16285 (GII79_16285) bceS 3114900..3115904 (-) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  GII79_RS16290 (GII79_16290) braR 3115897..3116592 (-) 696 WP_003229133.1 two-component response regulator BceR Regulator
  GII79_RS16295 (GII79_16295) ytrF 3116689..3117999 (-) 1311 WP_029726912.1 ABC transporter permease YtrF -
  GII79_RS16300 (GII79_16300) ytrE 3117989..3118684 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  GII79_RS16305 (GII79_16305) ytrD 3118699..3119676 (-) 978 WP_029726913.1 ABC transporter permease YtrD -
  GII79_RS16310 (GII79_16310) ytrC 3119706..3120692 (-) 987 WP_029726914.1 ABC transporter permease YtrC -
  GII79_RS16315 (GII79_16315) ytrB 3120686..3121564 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26865.76 Da        Isoelectric Point: 5.6471

>NTDB_id=347614 GII79_RS16290 WP_003229133.1 3115897..3116592(-) (braR) [Bacillus subtilis strain MB8_B1]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNNKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=347614 GII79_RS16290 WP_003229133.1 3115897..3116592(-) (braR) [Bacillus subtilis strain MB8_B1]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCTATGCAGCTCGGGGCAGATGACTTTATTCAAAAACCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATAACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment