Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   GII79_RS09590 Genome accession   NZ_CP045823
Coordinates   1904302..1904919 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain MB8_B1     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1899302..1909919
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII79_RS09565 (GII79_09565) yndJ 1899632..1901272 (+) 1641 WP_029726670.1 YndJ family protein -
  GII79_RS09570 (GII79_09570) - 1901350..1901664 (+) 315 WP_029726671.1 hypothetical protein -
  GII79_RS09575 (GII79_09575) pghL 1901889..1902647 (+) 759 WP_015714006.1 gamma-polyglutamate hydrolase PghL -
  GII79_RS09580 (GII79_09580) - 1902674..1903123 (-) 450 WP_003245454.1 YndM family protein -
  GII79_RS09585 (GII79_09585) fosM 1903331..1903765 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  GII79_RS22170 - 1903674..1903950 (+) 277 Protein_1845 hypothetical protein -
  GII79_RS09590 (GII79_09590) dinR/lexA 1904302..1904919 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  GII79_RS09595 (GII79_09595) yneA 1905069..1905386 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  GII79_RS09600 (GII79_09600) dinL 1905405..1906058 (+) 654 WP_015714011.1 recombinase family protein -
  GII79_RS09605 (GII79_09605) ynzC 1906122..1906355 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  GII79_RS09610 (GII79_09610) recP/tkt 1906524..1908527 (+) 2004 WP_014476936.1 transketolase Machinery gene
  GII79_RS09615 (GII79_09615) sirA 1908680..1909126 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  GII79_RS09620 (GII79_09620) yneF 1909212..1909430 (+) 219 WP_003221221.1 YneF family protein -
  GII79_RS09625 (GII79_09625) ynzD 1909504..1909677 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=347570 GII79_RS09590 WP_003238209.1 1904302..1904919(-) (dinR/lexA) [Bacillus subtilis strain MB8_B1]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=347570 GII79_RS09590 WP_003238209.1 1904302..1904919(-) (dinR/lexA) [Bacillus subtilis strain MB8_B1]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GACTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1