Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   M013TW_RS03340 Genome accession   NC_016928
Coordinates   706432..707106 (+) Length   224 a.a.
NCBI ID   WP_001166497.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus M013     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 701432..712106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M013TW_RS03315 (M013TW_0641) - 701647..702714 (+) 1068 WP_000980139.1 membrane protein -
  M013TW_RS03320 (M013TW_0642) - 702865..703908 (+) 1044 WP_001030774.1 alpha/beta hydrolase -
  M013TW_RS03325 (M013TW_0643) - 704237..704665 (+) 429 WP_000198505.1 hypothetical protein -
  M013TW_RS03330 (M013TW_0644) - 704874..705380 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  M013TW_RS03335 (M013TW_0645) graX 705493..706416 (+) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  M013TW_RS03340 (M013TW_0646) braR 706432..707106 (+) 675 WP_001166497.1 response regulator transcription factor GraR/ApsR Regulator
  M013TW_RS03345 (M013TW_0647) graS 707099..708139 (+) 1041 WP_001061260.1 histidine kinase GraS/ApsS -
  M013TW_RS03350 (M013TW_0648) vraF 708283..709044 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  M013TW_RS03355 (M013TW_0649) vraG 709034..710923 (+) 1890 WP_000143626.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26106.97 Da        Isoelectric Point: 4.3968

>NTDB_id=34736 M013TW_RS03340 WP_001166497.1 706432..707106(+) (braR) [Staphylococcus aureus subsp. aureus M013]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=34736 M013TW_RS03340 WP_001166497.1 706432..707106(+) (braR) [Staphylococcus aureus subsp. aureus M013]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCTAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402

Multiple sequence alignment