Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GII81_RS16520 Genome accession   NZ_CP045820
Coordinates   3158620..3159315 (-) Length   231 a.a.
NCBI ID   WP_003229133.1    Uniprot ID   -
Organism   Bacillus subtilis strain MB9_B1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3153620..3164315
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII81_RS16500 (GII81_16500) yttA 3154047..3154793 (+) 747 WP_014480618.1 LMBR1 domain-containing protein -
  GII81_RS16505 (GII81_16505) bceB 3154830..3156770 (-) 1941 WP_046663905.1 bacitracin ABC transporter permease BceB -
  GII81_RS16510 (GII81_16510) bceA 3156760..3157521 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  GII81_RS16515 (GII81_16515) bceS 3157623..3158627 (-) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  GII81_RS16520 (GII81_16520) braR 3158620..3159315 (-) 696 WP_003229133.1 two-component response regulator BceR Regulator
  GII81_RS16525 (GII81_16525) ytrF 3159412..3160722 (-) 1311 WP_029726912.1 ABC transporter permease YtrF -
  GII81_RS16530 (GII81_16530) ytrE 3160712..3161407 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  GII81_RS16535 (GII81_16535) ytrD 3161422..3162399 (-) 978 WP_029726913.1 ABC transporter permease YtrD -
  GII81_RS16540 (GII81_16540) ytrC 3162429..3163415 (-) 987 WP_029726914.1 ABC transporter permease YtrC -
  GII81_RS16545 (GII81_16545) ytrB 3163409..3164287 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26865.76 Da        Isoelectric Point: 5.6471

>NTDB_id=347304 GII81_RS16520 WP_003229133.1 3158620..3159315(-) (braR) [Bacillus subtilis strain MB9_B1]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNNKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=347304 GII81_RS16520 WP_003229133.1 3158620..3159315(-) (braR) [Bacillus subtilis strain MB9_B1]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCTATGCAGCTCGGGGCAGATGACTTTATTCAAAAACCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATAACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377