Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | KAN02_RS10635 | Genome accession | NZ_CP036171 |
| Coordinates | 2203497..2203877 (-) | Length | 126 a.a. |
| NCBI ID | WP_087605560.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain KAN02 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2198497..2208877
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KAN02_RS10605 (KAN02_10605) | tadA | 2198502..2199005 (-) | 504 | WP_087605563.1 | tRNA adenosine(34) deaminase TadA | - |
| KAN02_RS10610 (KAN02_10610) | - | 2199012..2200136 (-) | 1125 | WP_006580787.1 | enoyl-CoA hydratase/isomerase family protein | - |
| KAN02_RS10615 (KAN02_10615) | ung | 2200133..2200846 (-) | 714 | WP_002049829.1 | uracil-DNA glycosylase | - |
| KAN02_RS10620 (KAN02_10620) | - | 2200897..2201493 (-) | 597 | WP_002050068.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| KAN02_RS10625 (KAN02_10625) | gspK | 2201723..2202682 (-) | 960 | WP_087605562.1 | type II secretion system minor pseudopilin GspK | - |
| KAN02_RS10630 (KAN02_10630) | xcpW | 2202682..2203497 (-) | 816 | WP_087605561.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| KAN02_RS10635 (KAN02_10635) | xcpV | 2203497..2203877 (-) | 381 | WP_087605560.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| KAN02_RS10640 (KAN02_10640) | - | 2203867..2204418 (-) | 552 | WP_087605559.1 | type II secretion system protein | - |
| KAN02_RS10645 (KAN02_10645) | - | 2204428..2205036 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| KAN02_RS10650 (KAN02_10650) | - | 2205074..2205847 (-) | 774 | WP_004709116.1 | TatD family hydrolase | - |
| KAN02_RS10655 (KAN02_10655) | - | 2205865..2206206 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| KAN02_RS10660 (KAN02_10660) | - | 2206219..2207199 (-) | 981 | WP_032011231.1 | DNA polymerase III subunit delta' | - |
| KAN02_RS10665 (KAN02_10665) | kdsB | 2207211..2207972 (-) | 762 | WP_004887485.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14024.23 Da Isoelectric Point: 9.3834
>NTDB_id=347293 KAN02_RS10635 WP_087605560.1 2203497..2203877(-) (xcpV) [Acinetobacter nosocomialis strain KAN02]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIAMMEINQEWLQGTQTQQVTSQGETWQI
YKSAESTVSPNVQKIDVQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIAMMEINQEWLQGTQTQQVTSQGETWQI
YKSAESTVSPNVQKIDVQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=347293 KAN02_RS10635 WP_087605560.1 2203497..2203877(-) (xcpV) [Acinetobacter nosocomialis strain KAN02]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTAGCAGCTGTTGCTTTAACTAA
AGTGGCAATGCAGTATACTCAGTCTACTTCTAATGCCATTTTAAGAACTAAAGCTCAATTTGTAGCTATGAATGAAATTG
CTATGATGGAGATTAATCAAGAGTGGCTGCAGGGCACTCAAACTCAGCAAGTAACTTCTCAAGGAGAGACTTGGCAGATT
TATAAATCAGCTGAATCAACTGTTAGCCCTAATGTTCAAAAAATTGATGTACAAGTTAGCTTATATGATCCGGATAAGGG
AAAAGTACAAAACGGTATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTAGCAGCTGTTGCTTTAACTAA
AGTGGCAATGCAGTATACTCAGTCTACTTCTAATGCCATTTTAAGAACTAAAGCTCAATTTGTAGCTATGAATGAAATTG
CTATGATGGAGATTAATCAAGAGTGGCTGCAGGGCACTCAAACTCAGCAAGTAACTTCTCAAGGAGAGACTTGGCAGATT
TATAAATCAGCTGAATCAACTGTTAGCCCTAATGTTCAAAAAATTGATGTACAAGTTAGCTTATATGATCCGGATAAGGG
AAAAGTACAAAACGGTATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
94.444 |
100 |
0.944 |