Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   KAN02_RS03470 Genome accession   NZ_CP036171
Coordinates   718192..722715 (+) Length   1507 a.a.
NCBI ID   WP_087606585.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain KAN02     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 713192..727715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KAN02_RS03445 (KAN02_03445) - 713629..714267 (-) 639 WP_002051486.1 hypothetical protein -
  KAN02_RS03450 (KAN02_03450) pilG 714550..714933 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  KAN02_RS03455 (KAN02_03455) - 714960..715322 (+) 363 WP_002051151.1 PleD family two-component system response regulator -
  KAN02_RS03460 (KAN02_03460) - 715380..715916 (+) 537 WP_004885375.1 chemotaxis protein CheW -
  KAN02_RS03465 (KAN02_03465) - 715963..718044 (+) 2082 WP_004885376.1 methyl-accepting chemotaxis protein -
  KAN02_RS03470 (KAN02_03470) chpA 718192..722715 (+) 4524 WP_087606585.1 hybrid sensor histidine kinase/response regulator Regulator
  KAN02_RS03475 (KAN02_03475) - 722712..723179 (+) 468 WP_002051358.1 hypothetical protein -
  KAN02_RS03480 (KAN02_03480) dapE 723429..724562 (-) 1134 WP_087606586.1 succinyl-diaminopimelate desuccinylase -
  KAN02_RS03485 (KAN02_03485) - 724688..724831 (-) 144 WP_002051109.1 entericidin A/B family lipoprotein -
  KAN02_RS03490 (KAN02_03490) - 724944..725837 (-) 894 WP_087606587.1 DUF1853 family protein -
  KAN02_RS03495 (KAN02_03495) - 725942..726310 (+) 369 WP_002051275.1 YbaN family protein -
  KAN02_RS03500 (KAN02_03500) elsL 726460..726963 (+) 504 WP_002051179.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1507 a.a.        Molecular weight: 171431.77 Da        Isoelectric Point: 4.3354

>NTDB_id=347288 KAN02_RS03470 WP_087606585.1 718192..722715(+) (chpA) [Acinetobacter nosocomialis strain KAN02]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIEEIFVDLQPLLNEWMQSENTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQTLKLTPAIQSYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETITGLELDYIEQNSLAEPIVEDVDTEIAINLDETLTLFMEEAEEHLTTIHQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSNSDEILLLQEYREFIRDSLELLSKHSSNEQLDARLQQFNQSWDAYVEQ
HGDRTDPLTPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYDV
LLDKPLLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSVHNDLSQQDPTSVEPLFNIEP
EPEAAVTVENLSDSADWAVLSQSVQQDRQYISSTQVNQNFDPDLLDIFLEEADELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGSITHELESIYERLIQKQLVATSPLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQTSNFQPGPVVEIFDSESEIFSEQELISEVLIEEVPAEIEPVLTELEVHDDQVVFDNVVTELATPVEAITSVTSQENEA
VVEEQDITAVVEQTFLEEAAELLEMADGLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGSEAVYAIAYQLENTFEQFA
LHHFNSNIYDHLLESAIAWLKDAIFKHNYQHFDGLQQSLENIQFFETNIQIPTKLTKTDLFSSEPVMTFIQGDGTEPPPM
MGAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELETQIIAK
HGIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSHKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLL
PRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRAQRQQANKPEAGRIELNIQRQGTD
VVVVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEQQDILQLIFHPGLSTAEQITQISGRGVGLDVVQSDIKALGGHVSVD
SVYGKGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFESPKELFEYENKRYPLRYLSEFVGNQ
PMPRLNGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFASIGAIAGATILGDGQVCLILDGQNIARQIQS
TPRHKQLSEAVYRQRESDERRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGF
EVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4524 bp        

>NTDB_id=347288 KAN02_RS03470 WP_087606585.1 718192..722715(+) (chpA) [Acinetobacter nosocomialis strain KAN02]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAAATTTTCGTTGAAGAAATTGAAGAAATTTTTGTTGATTTGCAACCATTATTAAATGAATGGATGCAGTCTGAGAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTCCACACTTTAAAAGGTTCTGGAAGAATGATCGGTGCTAAATCTTCAGCT
GAGCTTGCTTGGACAGTTGAAGACACGCTTAATCGCGTAATCAATCAAACCCTTAAATTGACTCCAGCAATCCAGAGCTA
TGTTCAATTAGTATTTAAGTTCTATTTTCTTAAATTAGTAGATAACTTTAAGCAAAAAAGAGCACATGCAGTAGATTTTC
GACCGCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAGCTTTCA
AATACGCTTACTGCCGAAACAATAACTGGGCTTGAGCTAGACTATATTGAGCAAAACTCATTGGCTGAGCCAATTGTTGA
AGATGTAGATACTGAAATTGCAATAAATCTAGATGAAACTTTGACCTTGTTTATGGAAGAGGCAGAGGAGCATTTAACTA
CAATTCATCAGTTCTTAAATCAAGAGCTGCATCAGTATGATAGTTATAATGCCTTAATACGCGCGCTACATACTTTGCGT
GGCAGTTCTGCGATGGCGCAGGTCGAAACAATTTTTGAAGCCAGTACCAAAGTTGAGCACTTATTTAAAATACTGTTGCA
AGAAGAACTTTCTTCTAACTCAGATGAAATTTTATTATTACAAGAATATCGTGAGTTTATTAGAGATAGCTTAGAGCTTC
TATCTAAACATAGTTCAAATGAACAGCTTGACGCGAGATTGCAGCAGTTTAATCAATCATGGGATGCTTACGTTGAGCAA
CATGGTGACCGAACAGATCCATTAACACCTTCTCATGGTTTGGTATCACAACTATTGTTGTTAGATGTTTCTGAATTATT
AGATGCAGAGTTAGATTTTGAGAAAGGCATTCGTAATGAGTTTCCAGATTATCTTGAACGTCTAAGTGAACAAGCTGATC
TGCTGTTACAACATACACACTCTCAAGCAATGCTGGGTTTACATGAATATACCAGTCAATTGAAAGAAAGTTATGATGTA
TTACTTGATAAACCTCTATTATTGCAATCAGACTATATATTTGAAATTTATCAAAAAGCGCATCAACAGCTTATTCAATT
GTTCGATGCCTTGGCTGCTGGTCAGCGAGTTGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CCCTACATACTCCGAGCGTACACAATGACCTGTCTCAGCAAGATCCTACTTCTGTTGAGCCACTATTTAATATCGAACCA
GAGCCAGAAGCTGCTGTTACGGTAGAGAATTTATCAGACTCTGCAGACTGGGCAGTATTAAGCCAGAGTGTACAGCAAGA
TCGCCAATATATTTCTTCTACACAGGTAAATCAAAACTTTGATCCTGACCTTTTAGATATCTTCCTTGAAGAGGCTGATG
AACTACTGGAGGGAATTGATACCGATCTCAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCCCTGAATAATCTAATG
CGCTATTTGCATACCTTGAAAGGTGGAGCAAATATGGTTCAGGCGACTTATCTAGGTTCGATTACCCATGAATTAGAAAG
CATATATGAGCGTTTAATTCAAAAGCAGTTAGTTGCAACTTCACCGTTAATTGATTTTATCCGTTTAGTACAAGATGACT
TGGCTGACCGTCTGCAAATCATGCGTGAACAACAATTAGATTATGCAGCTCCTTACACAATTAATGCGTTAAAACGAGCA
GGTCAAACCTCTAACTTCCAACCTGGACCAGTGGTTGAAATATTTGATAGTGAAAGTGAGATCTTCTCTGAACAAGAGCT
GATATCTGAAGTATTAATCGAAGAAGTACCGGCAGAAATTGAGCCTGTTCTTACAGAATTAGAAGTTCATGATGATCAGG
TGGTATTTGATAACGTTGTTACTGAGTTAGCTACGCCAGTTGAAGCAATAACATCCGTTACATCACAAGAGAATGAAGCG
GTAGTTGAAGAACAGGATATTACGGCTGTTGTTGAGCAGACATTCCTAGAAGAAGCTGCTGAATTGTTAGAAATGGCTGA
TGGGCTATTGAAACAATGGTTTGAGCAGCGTACAAACCGAAGTATCTTGCTTCAATTACAAAGAGCTGTGCACAGTTTGA
AGGGTGGTGCACGAATGGTCGGTTCAGAAGCCGTCTACGCGATTGCCTATCAACTCGAAAATACATTCGAACAATTTGCG
TTACATCACTTCAACTCGAATATTTATGACCATTTGCTCGAAAGTGCAATTGCATGGCTAAAAGATGCTATTTTCAAGCA
TAACTATCAACATTTCGATGGATTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTCCGACTA
AGTTAACGAAAACTGATTTGTTTAGCTCAGAACCTGTGATGACCTTCATACAAGGTGATGGTACAGAACCACCACCAATG
ATGGGCGCATGGGAGCAAACAGAACGTCTGGATCAGAACAATGAAATGATCCGTGTTTCAGCAGACTTGATCGAGAAGAT
GATTGACTTGTCTGGTGAGAACTCGATTAACCGTTCACGAATTGAAATGGACTTGAGTCAGTTCGGTCATACATTGGTTG
AAATGGAATTGGCTATTCAACGACTGGCCGATCAGTTACGACGAATGGAAGGCGAGTTAGAAACACAAATTATTGCTAAA
CACGGTATTGAGCATTCTCGCTATACCGACTTTGACCCTTTAGAGATGGACCAATATTCATCTTTAAACCAGTTATCGAA
ATCTCTTGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTCACAAGATCAGAGATACAGAAAGTTTAC
TTTTACAACAGTCGCGTATCCAGGCAGAAATTCAAGAAGGCTTGATGCGAACACGATTGGTTCCATTTTCACGTTTGTTA
CCGCGTTTGCAGCGGATTGTGCGTCAAACATCTACAGCCTTGAATAGACCTGCTGAGCTTTTTGTAAATAATACAGAAGG
TGAGTTAGACCGTAACATTTTAGAACGCTTAGTGACGCCGCTTGAGCATATGCTTAGAAACGCAATTGACCATGGTTTAG
AAGACCGAGCACAGCGTCAACAAGCAAATAAACCGGAAGCAGGGCGTATTGAACTTAACATTCAACGTCAAGGTACAGAT
GTTGTCGTTGTCTTTAGCGATGATGGACAAGGTATTGATGTTGAAAAAGTGCGCCAGAAAGCACTACTCGCGGGTCTGAT
CAAGCCTGAACAGGACTTGGAACAGCAAGACATTCTACAGCTGATCTTCCATCCAGGGTTAAGTACTGCAGAACAGATTA
CTCAAATTTCTGGACGTGGTGTTGGTCTGGATGTCGTACAAAGCGATATTAAGGCTTTAGGTGGACATGTTAGCGTTGAC
TCTGTTTACGGTAAGGGAACCACATTTACTATTCGTGTACCGACCACTGTAGCTGTAAGTGATGCCTTAATGGTGAAAGT
AGCAGATCAGCAATTTGCGATTCCACTTGCTCAAATCGATCGAATTGTTCGAGTTTCGCCAGCTTCTTTAGAGCAGTATT
TTGAAAGTCCTAAAGAACTATTCGAGTATGAAAATAAACGTTATCCATTACGTTATCTTTCAGAATTTGTTGGTAATCAA
CCAATGCCACGTCTAAATGGCATGATGTATTCATTACCTGTCTTAATGATTAAAGCAAACAATGGTCAAACTGTGGCTTT
ACTTGTTGACCAGTTAATTGGTTCTCGAGCACAAATTGTAGTGAAACCAATTGGCCAACAGTTCGCTAGCATTGGGGCAA
TTGCAGGTGCGACTATTTTAGGTGATGGACAAGTTTGCTTAATTTTAGATGGACAAAATATTGCGCGACAAATTCAGTCT
ACTCCGCGTCACAAACAGCTTAGTGAAGCAGTATATAGACAACGAGAATCTGACGAGCGCCGTCTCGTTATGATTGTCGA
TGACTCGGTAACTGTACGTAAGGTAACGTCTCGATTACTTGAACGCCAAGGCTACGATGTTGTTACGGCTAAAGATGGTG
TTGATGCCATAGAGCAGCTAGAAAATATTAAGCCAGATCTAATGCTACTTGATATTGAAATGCCACGTATGGATGGTTTC
GAAGTACTGAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGTGAAAA
ACATCGTGAACGAGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAAGAGGAAGAGTTACTAGAGAATA
TCGATGCTTTACTTGTAGCTTTTGAAAGCGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

92.9

100

0.929


Multiple sequence alignment