Detailed information
Bioinformatically predicted
Overview
| Name | lrpC | Type | Machinery gene |
| Locus tag | M013TW_RS00365 | Genome accession | NC_016928 |
| Coordinates | 81208..81621 (+) | Length | 137 a.a. |
| NCBI ID | WP_000998780.1 | Uniprot ID | C1PH97 |
| Organism | Staphylococcus aureus subsp. aureus M013 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 76208..86621
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M013TW_RS00345 (M013TW_0068) | - | 76209..77495 (+) | 1287 | WP_000513494.1 | SIR2 family protein | - |
| M013TW_RS00350 (M013TW_02750) | - | 77501..79189 (+) | 1689 | WP_000555614.1 | ATP-binding protein | - |
| M013TW_RS14120 | - | 79350..79487 (+) | 138 | WP_021758025.1 | hypothetical protein | - |
| M013TW_RS00355 (M013TW_0072) | - | 79750..80361 (+) | 612 | WP_000856594.1 | hypothetical protein | - |
| M013TW_RS00360 (M013TW_0073) | - | 80700..81107 (-) | 408 | WP_000173401.1 | hypothetical protein | - |
| M013TW_RS00365 (M013TW_0074) | lrpC | 81208..81621 (+) | 414 | WP_000998780.1 | Lrp/AsnC family transcriptional regulator | Machinery gene |
| M013TW_RS00375 (M013TW_0075) | - | 81683..82156 (+) | 474 | WP_000455975.1 | GNAT family N-acetyltransferase | - |
| M013TW_RS00380 (M013TW_0076) | - | 82264..83250 (-) | 987 | WP_000662031.1 | tRNA-dihydrouridine synthase | - |
| M013TW_RS00385 (M013TW_02760) | - | 83558..83761 (+) | 204 | WP_000389759.1 | DUF6007 family protein | - |
| M013TW_RS00390 (M013TW_0077) | - | 83810..84106 (+) | 297 | WP_000179901.1 | TfoX/Sxy family protein | - |
| M013TW_RS00395 (M013TW_0078) | - | 84168..85388 (-) | 1221 | WP_000130756.1 | MFS transporter | - |
| M013TW_RS00400 (M013TW_0079) | - | 85381..85932 (-) | 552 | WP_000627025.1 | flavodoxin family protein | - |
| M013TW_RS00405 (M013TW_0080) | - | 86045..86530 (+) | 486 | Protein_75 | LysR family transcriptional regulator | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 15971.29 Da Isoelectric Point: 4.6692
>NTDB_id=34727 M013TW_RS00365 WP_000998780.1 81208..81621(+) (lrpC) [Staphylococcus aureus subsp. aureus M013]
MNDLINEKIINVLLNNSRITINELSKQVNLSAPAVRERVNKLEDQGIIKGYTINIDYKELGYDVEILIELTIKNNRYKDF
KEFISKQDNVEFCYRVSGEACFVFKVRLENMDEVETFVDTIQPYGQTKCQFIFSSVV
MNDLINEKIINVLLNNSRITINELSKQVNLSAPAVRERVNKLEDQGIIKGYTINIDYKELGYDVEILIELTIKNNRYKDF
KEFISKQDNVEFCYRVSGEACFVFKVRLENMDEVETFVDTIQPYGQTKCQFIFSSVV
Nucleotide
Download Length: 414 bp
>NTDB_id=34727 M013TW_RS00365 WP_000998780.1 81208..81621(+) (lrpC) [Staphylococcus aureus subsp. aureus M013]
ATGAATGACTTAATAAATGAAAAAATAATCAATGTTTTGTTAAATAATAGTAGAATTACTATTAATGAATTAAGTAAACA
AGTGAACTTATCTGCTCCAGCTGTAAGAGAAAGGGTAAATAAACTTGAAGATCAAGGTATTATAAAAGGTTATACAATTA
ACATAGATTATAAGGAATTAGGTTACGATGTAGAAATATTAATTGAGTTAACTATAAAGAATAATAGATACAAAGATTTT
AAAGAATTTATTTCAAAACAAGATAATGTTGAGTTTTGTTATCGTGTATCAGGAGAGGCATGTTTTGTATTTAAGGTTCG
GTTGGAAAATATGGATGAAGTGGAAACATTTGTTGATACCATACAACCATATGGGCAGACAAAATGTCAGTTTATCTTTT
CATCAGTTGTCTAA
ATGAATGACTTAATAAATGAAAAAATAATCAATGTTTTGTTAAATAATAGTAGAATTACTATTAATGAATTAAGTAAACA
AGTGAACTTATCTGCTCCAGCTGTAAGAGAAAGGGTAAATAAACTTGAAGATCAAGGTATTATAAAAGGTTATACAATTA
ACATAGATTATAAGGAATTAGGTTACGATGTAGAAATATTAATTGAGTTAACTATAAAGAATAATAGATACAAAGATTTT
AAAGAATTTATTTCAAAACAAGATAATGTTGAGTTTTGTTATCGTGTATCAGGAGAGGCATGTTTTGTATTTAAGGTTCG
GTTGGAAAATATGGATGAAGTGGAAACATTTGTTGATACCATACAACCATATGGGCAGACAAAATGTCAGTTTATCTTTT
CATCAGTTGTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lrpC | Bacillus subtilis subsp. subtilis str. 168 |
43.284 |
97.81 |
0.423 |