Detailed information NTG0347195

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: GII81_RS01665
• Genome accession: NZ_CP045820
• Coordinates: 302542..303663 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain MB9_B1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 297542..308663

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII81_RS01640 (GII81_01640)	ycdA	297547..298611 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
GII81_RS01645 (GII81_01645)	-	298634..298765 (-)	132	WP_003246334.1	hypothetical protein	-
GII81_RS01650 (GII81_01650)	ycdB	298939..300360 (+)	1422	WP_029726975.1	YcdB/YcdC domain-containing protein	-
GII81_RS01655 (GII81_01655)	ycdC	300547..301908 (+)	1362	WP_153912155.1	YcdB/YcdC domain-containing protein	-
GII81_RS01660 (GII81_01660)	cwlK	301916..302419 (-)	504	WP_120363247.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
GII81_RS01665 (GII81_01665)	rapF	302542..303663 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
GII81_RS01670 (GII81_01670)	ycdF	303770..304546 (+)	777	WP_029726977.1	SDR family oxidoreductase	-
GII81_RS01675 (GII81_01675)	ycdG	304571..306256 (+)	1686	WP_029726978.1	alpha-glucosidase	-
GII81_RS01680 (GII81_01680)	znuA	306444..307403 (+)	960	WP_029726979.1	metal ABC transporter substrate-binding protein	-
GII81_RS01685 (GII81_01685)	znuC	307458..308153 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=347195 GII81_RS01665 WP_015715201.1 302542..303663(+) (rapF) [Bacillus subtilis strain MB9_B1]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=347195 GII81_RS01665 WP_015715201.1 302542..303663(+) (rapF) [Bacillus subtilis strain MB9_B1]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCTTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGTT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405