Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EXW57_RS00525 | Genome accession | NZ_CP036145 |
| Coordinates | 95183..97618 (+) | Length | 811 a.a. |
| NCBI ID | WP_002063405.1 | Uniprot ID | - |
| Organism | Bacillus mycoides strain JAS94/5 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 90183..102618
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW57_RS00510 (EXW57_00510) | ctsR | 92912..93373 (+) | 462 | WP_002029353.1 | transcriptional regulator CtsR | - |
| EXW57_RS00515 (EXW57_00515) | - | 93543..94091 (+) | 549 | WP_002169333.1 | UvrB/UvrC motif-containing protein | - |
| EXW57_RS00520 (EXW57_00520) | - | 94096..95160 (+) | 1065 | WP_002169332.1 | protein arginine kinase | - |
| EXW57_RS00525 (EXW57_00525) | clpC | 95183..97618 (+) | 2436 | WP_002063405.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| EXW57_RS00530 (EXW57_00530) | radA | 97713..99089 (+) | 1377 | WP_002169331.1 | DNA repair protein RadA | Machinery gene |
| EXW57_RS00535 (EXW57_00535) | disA | 99093..100166 (+) | 1074 | WP_000392162.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| EXW57_RS00540 (EXW57_00540) | - | 100327..101430 (+) | 1104 | WP_002063406.1 | PIN/TRAM domain-containing protein | - |
| EXW57_RS00545 (EXW57_00545) | ispD | 101447..102127 (+) | 681 | WP_002009811.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90613.47 Da Isoelectric Point: 6.4056
>NTDB_id=347107 EXW57_RS00525 WP_002063405.1 95183..97618(+) (clpC) [Bacillus mycoides strain JAS94/5]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPNLEESVQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEKQGQENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDIEGE
SFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPNLEESVQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEKQGQENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDIEGE
SFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=347107 EXW57_RS00525 WP_002063405.1 95183..97618(+) (clpC) [Bacillus mycoides strain JAS94/5]
ATGATGTTTGGAAGATTTACAGAACGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAGGTAGAAGCATTAATTGGACGTGGAACGGAAGCTTCTCAAACAGTACATTAC
ACACCTCGTGCTAAAAAAGTTATTGAGTTGTCTATGGACGAAGCTCGTAAGCTAGGCCATTCCTACGTTGGAACAGAACA
TATTTTACTTGGTTTAATCCGTGAAGGTGAAGGTGTAGCAGCACGCGTTTTAAATAATTTAGGTGTAAGCCTAAATAAAG
CAAGACAACAAGTGTTACAACTCCTTGGAAGTAATGAAGCTAGTTCAGGTCACCAGGGTGGTTCATCAACAAATGCGAAT
ACACCTACACTTGACAGTCTAGCACGTGATTTAACAGTTGTTGCACGTGAAAATCGTTTAGATCCTGTTATTGGACGTAG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTATTAATTGGAGAACCTGGTGTAG
GTAAGACAGCAATTGCGGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACATTAGATATGGGTACAGTTGTTGCTGGAACAAAATATCGTGGTGAATTTGAGGATCGTTTAAAGAAAGTGATGGA
TGAGATTCGCCAAGCTGGTAACATCATTCTATTTATTGATGAGCTTCATACGTTAATTGGTGCAGGAGGGGCAGAAGGTG
CAATTGATGCATCGAATATTTTAAAACCATCTTTAGCACGTGGTGAATTACAATGTATTGGTGCAACAACTTTAGACGAA
TATCGTAAATATATTGAAAAGGATGCGGCATTAGAAAGACGTTTCCAACCAATTCATGTTGATGAACCAAACTTAGAAGA
ATCAGTTCAGATTTTAAAAGGTTTACGTGACCGTTATGAGGCGCATCACCGCGTATCTATTACAGATGATGCAATCGATG
CGGCTGTAAAACTTTCAGATCGTTACATTACAGACCGTTTTTTACCTGATAAAGCAATCGATTTAATTGATGAGGCTGCA
TCAAAAGTGCGCTTACGTTCTTATACAACACCGCCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTACAAAGCCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGTTTGCGTGAAAAGT
TAGAAGATACAAAGCGTCAGTGGAAAGAGAAACAAGGACAAGAAAACTCAGAAGTAACAGTAGAAGATATTGCAAATGTC
GTTTCCACATGGACGCGTATTCCAGTTTCTAAACTTGCACAAACAGAGACAGATAAATTATTAAACTTGGAATCAATTTT
ACATGATCGTTTAATTGGGCAGGATGAAGCAGTTGTAGCTGTGGCAAAAGCTGTTCGTCGTGCGAGAGCGGGATTAAAAG
ATCCGAAACGTCCAATTGGCTCATTTATTTTCCTAGGACCTACTGGTGTAGGTAAAACAGAACTAGCAAGGGCATTAGCG
GAATCTATGTTCGGTGATGAGGATGCAATGATCCGCATCGATATGTCTGAGTACATGGAAAAGCATTCTACTTCTCGTTT
AGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGTAAGCCATATTCAG
TTGTCTTATTAGATGAAGTAGAGAAAGCTCATCCTGATGTGTTTAATATTTTACTACAAGTATTAGAAGATGGCCGTTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACAATTGTTATTATGACGTCTAATGTTGGTGCAGACGCATTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAT
TGAAAAAAGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTAACTCTTATGGTGAATCAGTTAGTGAATCGCTTAAAAGAACAAGAGATTGAATTGCATTTAACAGAAGG
AGCAATTTCAGCAATTGCTGATAAAGGATTTGATCGAGAGTACGGTGCTCGTCCGCTTCGTAGAGCAATTCAAAAACATG
TAGAAGATAGACTATCAGAAGAACTGTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATATAGAAGGAGAA
TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAACGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAGGTAGAAGCATTAATTGGACGTGGAACGGAAGCTTCTCAAACAGTACATTAC
ACACCTCGTGCTAAAAAAGTTATTGAGTTGTCTATGGACGAAGCTCGTAAGCTAGGCCATTCCTACGTTGGAACAGAACA
TATTTTACTTGGTTTAATCCGTGAAGGTGAAGGTGTAGCAGCACGCGTTTTAAATAATTTAGGTGTAAGCCTAAATAAAG
CAAGACAACAAGTGTTACAACTCCTTGGAAGTAATGAAGCTAGTTCAGGTCACCAGGGTGGTTCATCAACAAATGCGAAT
ACACCTACACTTGACAGTCTAGCACGTGATTTAACAGTTGTTGCACGTGAAAATCGTTTAGATCCTGTTATTGGACGTAG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTATTAATTGGAGAACCTGGTGTAG
GTAAGACAGCAATTGCGGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACATTAGATATGGGTACAGTTGTTGCTGGAACAAAATATCGTGGTGAATTTGAGGATCGTTTAAAGAAAGTGATGGA
TGAGATTCGCCAAGCTGGTAACATCATTCTATTTATTGATGAGCTTCATACGTTAATTGGTGCAGGAGGGGCAGAAGGTG
CAATTGATGCATCGAATATTTTAAAACCATCTTTAGCACGTGGTGAATTACAATGTATTGGTGCAACAACTTTAGACGAA
TATCGTAAATATATTGAAAAGGATGCGGCATTAGAAAGACGTTTCCAACCAATTCATGTTGATGAACCAAACTTAGAAGA
ATCAGTTCAGATTTTAAAAGGTTTACGTGACCGTTATGAGGCGCATCACCGCGTATCTATTACAGATGATGCAATCGATG
CGGCTGTAAAACTTTCAGATCGTTACATTACAGACCGTTTTTTACCTGATAAAGCAATCGATTTAATTGATGAGGCTGCA
TCAAAAGTGCGCTTACGTTCTTATACAACACCGCCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTACAAAGCCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGTTTGCGTGAAAAGT
TAGAAGATACAAAGCGTCAGTGGAAAGAGAAACAAGGACAAGAAAACTCAGAAGTAACAGTAGAAGATATTGCAAATGTC
GTTTCCACATGGACGCGTATTCCAGTTTCTAAACTTGCACAAACAGAGACAGATAAATTATTAAACTTGGAATCAATTTT
ACATGATCGTTTAATTGGGCAGGATGAAGCAGTTGTAGCTGTGGCAAAAGCTGTTCGTCGTGCGAGAGCGGGATTAAAAG
ATCCGAAACGTCCAATTGGCTCATTTATTTTCCTAGGACCTACTGGTGTAGGTAAAACAGAACTAGCAAGGGCATTAGCG
GAATCTATGTTCGGTGATGAGGATGCAATGATCCGCATCGATATGTCTGAGTACATGGAAAAGCATTCTACTTCTCGTTT
AGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGTAAGCCATATTCAG
TTGTCTTATTAGATGAAGTAGAGAAAGCTCATCCTGATGTGTTTAATATTTTACTACAAGTATTAGAAGATGGCCGTTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACAATTGTTATTATGACGTCTAATGTTGGTGCAGACGCATTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAT
TGAAAAAAGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTAACTCTTATGGTGAATCAGTTAGTGAATCGCTTAAAAGAACAAGAGATTGAATTGCATTTAACAGAAGG
AGCAATTTCAGCAATTGCTGATAAAGGATTTGATCGAGAGTACGGTGCTCGTCCGCTTCGTAGAGCAATTCAAAAACATG
TAGAAGATAGACTATCAGAAGAACTGTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATATAGAAGGAGAA
TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
85.802 |
99.877 |
0.857 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.125 |
98.644 |
0.494 |
| clpC | Streptococcus thermophilus LMD-9 |
45.728 |
100 |
0.469 |
| clpC | Streptococcus mutans UA159 |
44.762 |
100 |
0.464 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.235 |
100 |
0.462 |
| clpC | Streptococcus pneumoniae D39 |
46.424 |
98.274 |
0.456 |
| clpC | Streptococcus pneumoniae Rx1 |
46.424 |
98.274 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.125 |
98.644 |
0.455 |
| clpE | Streptococcus mutans UA159 |
53.231 |
80.148 |
0.427 |
| clpE | Streptococcus pneumoniae R6 |
52.087 |
79.778 |
0.416 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.087 |
79.778 |
0.416 |
| clpE | Streptococcus pneumoniae Rx1 |
52.087 |
79.778 |
0.416 |
| clpE | Streptococcus pneumoniae D39 |
52.087 |
79.778 |
0.416 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
51.42 |
78.175 |
0.402 |