Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW42_RS03775 | Genome accession | NZ_CP036137 |
| Coordinates | 726572..726856 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843037.1 | Uniprot ID | A0A366FUU6 |
| Organism | Bacillus mycoides strain JAS85/1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 721572..731856
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW42_RS03740 (EXW42_03835) | tmk | 721726..722352 (+) | 627 | WP_002130202.1 | dTMP kinase | - |
| EXW42_RS03745 (EXW42_03840) | holB | 722388..723371 (+) | 984 | WP_002009636.1 | DNA polymerase III subunit delta' | - |
| EXW42_RS03750 (EXW42_03845) | - | 723377..724204 (+) | 828 | WP_002009637.1 | stage 0 sporulation family protein | - |
| EXW42_RS03755 (EXW42_03850) | yabA | 724219..724569 (+) | 351 | WP_002009639.1 | DNA replication initiation control protein YabA | - |
| EXW42_RS03760 (EXW42_03855) | - | 724690..725430 (+) | 741 | WP_002130206.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| EXW42_RS03765 (EXW42_03860) | - | 725417..725707 (+) | 291 | WP_002130207.1 | GIY-YIG nuclease family protein | - |
| EXW42_RS03770 (EXW42_03865) | rsmI | 725676..726551 (+) | 876 | WP_002130208.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| EXW42_RS03775 (EXW42_03870) | abrB | 726572..726856 (-) | 285 | WP_000843037.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW42_RS03780 (EXW42_03875) | metG | 727376..729358 (+) | 1983 | WP_033728750.1 | methionine--tRNA ligase | - |
| EXW42_RS03785 (EXW42_03880) | - | 729524..730291 (+) | 768 | WP_002009645.1 | TatD family hydrolase | - |
| EXW42_RS03790 (EXW42_03885) | rnmV | 730552..731109 (+) | 558 | WP_002029323.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10476.14 Da Isoelectric Point: 4.7174
>NTDB_id=347065 EXW42_RS03775 WP_000843037.1 726572..726856(-) (abrB) [Bacillus mycoides strain JAS85/1]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=347065 EXW42_RS03775 WP_000843037.1 726572..726856(-) (abrB) [Bacillus mycoides strain JAS85/1]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
84.043 |
100 |
0.84 |