Detailed information NTG0347042

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: GII82_RS01660
• Genome accession: NZ_CP045819
• Coordinates: 302546..303667 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain MB9_B4
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 297546..308667

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII82_RS01635 (GII82_01635)	ycdA	297551..298615 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
GII82_RS01640 (GII82_01640)	-	298638..298769 (-)	132	WP_003246334.1	hypothetical protein	-
GII82_RS01645 (GII82_01645)	ycdB	298943..300364 (+)	1422	WP_029726975.1	YcdB/YcdC domain-containing protein	-
GII82_RS01650 (GII82_01650)	ycdC	300551..301912 (+)	1362	WP_029726976.1	YcdB/YcdC domain-containing protein	-
GII82_RS01655 (GII82_01655)	cwlK	301920..302423 (-)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
GII82_RS01660 (GII82_01660)	rapF	302546..303667 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
GII82_RS01665 (GII82_01665)	ycdF	303774..304550 (+)	777	WP_029726977.1	SDR family oxidoreductase	-
GII82_RS01670 (GII82_01670)	ycdG	304575..306260 (+)	1686	WP_029726978.1	alpha-glucosidase	-
GII82_RS01675 (GII82_01675)	znuA	306448..307407 (+)	960	WP_029726979.1	metal ABC transporter substrate-binding protein	-
GII82_RS01680 (GII82_01680)	znuC	307462..308157 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=347042 GII82_RS01660 WP_015715201.1 302546..303667(+) (rapF) [Bacillus subtilis strain MB9_B4]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=347042 GII82_RS01660 WP_015715201.1 302546..303667(+) (rapF) [Bacillus subtilis strain MB9_B4]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCTTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGTT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405