Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   EXW55_RS19640 Genome accession   NZ_CP036121
Coordinates   3845682..3846476 (-) Length   264 a.a.
NCBI ID   WP_002015081.1    Uniprot ID   R8I3Q7
Organism   Bacillus mycoides strain JAS635     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3840682..3851476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW55_RS32010 - 3841231..3841329 (-) 99 Protein_3915 sporulation initiation factor Spo0A C-terminal domain-containing protein -
  EXW55_RS19620 (EXW55_19950) - 3841568..3841843 (-) 276 WP_098635955.1 hypothetical protein -
  EXW55_RS19625 (EXW55_19955) - 3841880..3842452 (-) 573 WP_098635954.1 DUF1629 domain-containing protein -
  EXW55_RS19630 (EXW55_19960) - 3842671..3843240 (-) 570 WP_098635953.1 DUF1629 domain-containing protein -
  EXW55_RS19635 (EXW55_19965) - 3843276..3844934 (-) 1659 Protein_3919 AHH domain-containing protein -
  EXW55_RS19640 (EXW55_19975) spo0A 3845682..3846476 (-) 795 WP_002015081.1 sporulation transcription factor Spo0A Regulator
  EXW55_RS19645 (EXW55_19985) spoIVB 3846763..3848055 (-) 1293 WP_002015079.1 SpoIVB peptidase -
  EXW55_RS19650 (EXW55_19990) recN 3848175..3849914 (-) 1740 WP_002088564.1 DNA repair protein RecN Machinery gene
  EXW55_RS19655 (EXW55_19995) argR 3850185..3850634 (-) 450 WP_002015076.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29525.32 Da        Isoelectric Point: 7.1180

>NTDB_id=346979 EXW55_RS19640 WP_002015081.1 3845682..3846476(-) (spo0A) [Bacillus mycoides strain JAS635]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGIAYNGQECLNLLKEKQPDILVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKESATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=346979 EXW55_RS19640 WP_002015081.1 3845682..3846476(-) (spo0A) [Bacillus mycoides strain JAS635]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCGATGCTAGAGAGTTATGTTGCTGCCCAAGA
TGATATGGAAGTTATCGGAATTGCTTACAATGGTCAAGAATGTTTAAACTTATTGAAAGAAAAGCAGCCTGATATACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTCTAGCTGTGCTAGAGAAAATGCGACATATTGAAAGGTTAAGACAACCT
AGCGTTATTATGTTGACAGCATTCGGACAAGAAGATGTGACGAAAAAAGCGGTTGATTTAGGGGCATCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTTAGTGGTAAGGAAAGTGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACGATAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACAAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGGTACATGTACTTACGAGAAGCAATCTCTATGGTGTACAATGATATTGAATTACT
AGGATCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGCGCAATCC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTTGGTTATACTGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTCATCGCAATGGTTGCGGATAAGCTAAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB R8I3Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment