Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   GII83_RS09610 Genome accession   NZ_CP045818
Coordinates   1907621..1909624 (+) Length   667 a.a.
NCBI ID   WP_014476936.1    Uniprot ID   -
Organism   Bacillus subtilis strain MB9_B6     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1902621..1914624
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII83_RS09575 (GII83_09575) pghL 1902986..1903744 (+) 759 WP_015714006.1 gamma-polyglutamate hydrolase PghL -
  GII83_RS09580 (GII83_09580) - 1903771..1904220 (-) 450 WP_003245454.1 YndM family protein -
  GII83_RS09585 (GII83_09585) fosM 1904428..1904862 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  GII83_RS21255 - 1904771..1905047 (+) 277 Protein_1846 hypothetical protein -
  GII83_RS09590 (GII83_09590) dinR/lexA 1905399..1906016 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  GII83_RS09595 (GII83_09595) yneA 1906166..1906483 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  GII83_RS09600 (GII83_09600) dinL 1906502..1907155 (+) 654 WP_015714011.1 recombinase family protein -
  GII83_RS09605 (GII83_09605) ynzC 1907219..1907452 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  GII83_RS09610 (GII83_09610) recP/tkt 1907621..1909624 (+) 2004 WP_014476936.1 transketolase Machinery gene
  GII83_RS09615 (GII83_09615) sirA 1909777..1910223 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  GII83_RS09620 (GII83_09620) yneF 1910309..1910527 (+) 219 WP_003221221.1 YneF family protein -
  GII83_RS09625 (GII83_09625) ynzD 1910601..1910774 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  GII83_RS09630 (GII83_09630) ccdA 1910994..1911701 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  GII83_RS09635 (GII83_09635) yneI 1911790..1912152 (+) 363 WP_003245707.1 response regulator -
  GII83_RS09640 (GII83_09640) yneJ 1912231..1912722 (+) 492 WP_010886519.1 CcdC family protein -
  GII83_RS09645 (GII83_09645) yneK 1912753..1913181 (-) 429 WP_003231580.1 DynA interaction protein YneK -
  GII83_RS09650 (GII83_09650) cotM 1913415..1913807 (-) 393 WP_072174018.1 outer spore coat protein CotM -
  GII83_RS09655 (GII83_09655) sspP 1913887..1914033 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  GII83_RS09660 (GII83_09660) sspO 1914065..1914211 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72300.39 Da        Isoelectric Point: 4.7291

>NTDB_id=346956 GII83_RS09610 WP_014476936.1 1907621..1909624(+) (recP/tkt) [Bacillus subtilis strain MB9_B6]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTAEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=346956 GII83_RS09610 WP_014476936.1 1907621..1909624(+) (recP/tkt) [Bacillus subtilis strain MB9_B6]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCTGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATTGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCAAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACAGCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCCTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCTGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562