Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW43_RS10340 | Genome accession | NZ_CP036117 |
| Coordinates | 1925273..1925560 (+) | Length | 95 a.a. |
| NCBI ID | WP_002012401.1 | Uniprot ID | A0A366G1Y4 |
| Organism | Bacillus mycoides strain JAS481 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1920273..1930560
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW43_RS10320 (EXW43_10570) | - | 1921463..1921650 (+) | 188 | Protein_1824 | DUF4083 domain-containing protein | - |
| EXW43_RS10325 (EXW43_10575) | - | 1921678..1922139 (+) | 462 | WP_002130989.1 | NUDIX hydrolase | - |
| EXW43_RS10330 (EXW43_10580) | nadE | 1922184..1923002 (-) | 819 | WP_002012398.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW43_RS10335 (EXW43_10585) | - | 1923273..1925153 (+) | 1881 | WP_002012400.1 | FtsX-like permease family protein | - |
| EXW43_RS10340 (EXW43_10590) | abrB | 1925273..1925560 (+) | 288 | WP_002012401.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW43_RS10345 (EXW43_10595) | - | 1925891..1926841 (+) | 951 | WP_002012402.1 | serine protease | - |
| EXW43_RS10350 (EXW43_10600) | - | 1926882..1927190 (-) | 309 | WP_002012403.1 | helix-turn-helix transcriptional regulator | - |
| EXW43_RS10355 (EXW43_10605) | - | 1927298..1928233 (+) | 936 | WP_003188755.1 | aldo/keto reductase | - |
| EXW43_RS10360 (EXW43_10610) | - | 1928283..1928486 (+) | 204 | WP_002012406.1 | hypothetical protein | - |
| EXW43_RS10365 (EXW43_10615) | - | 1928517..1928741 (-) | 225 | WP_002012407.1 | hypothetical protein | - |
| EXW43_RS10370 (EXW43_10620) | - | 1928826..1929173 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
| EXW43_RS10375 (EXW43_10625) | - | 1929370..1929896 (+) | 527 | Protein_1835 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10647.42 Da Isoelectric Point: 6.9795
>NTDB_id=346926 EXW43_RS10340 WP_002012401.1 1925273..1925560(+) (abrB) [Bacillus mycoides strain JAS481]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
Nucleotide
Download Length: 288 bp
>NTDB_id=346926 EXW43_RS10340 WP_002012401.1 1925273..1925560(+) (abrB) [Bacillus mycoides strain JAS481]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGTATAGTTATTCCTAAAGAATTACGGGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCATACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGTATAGTTATTCCTAAAGAATTACGGGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCATACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |