Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW25_RS09895 | Genome accession | NZ_CP036111 |
| Coordinates | 1954195..1954482 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648323.1 | Uniprot ID | A0A1V6LCK0 |
| Organism | Bacillus toyonensis strain JAS411 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1949195..1959482
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW25_RS09875 (EXW25_10040) | - | 1950277..1950474 (+) | 198 | WP_097953349.1 | DUF4083 domain-containing protein | - |
| EXW25_RS09880 (EXW25_10050) | - | 1950604..1951065 (+) | 462 | WP_000796418.1 | NUDIX hydrolase | - |
| EXW25_RS09885 (EXW25_10055) | nadE | 1951108..1951926 (-) | 819 | WP_000174898.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW25_RS09890 (EXW25_10060) | - | 1952200..1954080 (+) | 1881 | WP_097953350.1 | ABC transporter permease | - |
| EXW25_RS09895 (EXW25_10065) | abrB | 1954195..1954482 (+) | 288 | WP_000648323.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW25_RS09900 (EXW25_10070) | - | 1954743..1955693 (+) | 951 | WP_001089053.1 | serine protease | - |
| EXW25_RS09905 (EXW25_10075) | - | 1955734..1956042 (-) | 309 | WP_001259900.1 | helix-turn-helix transcriptional regulator | - |
| EXW25_RS09910 (EXW25_10080) | - | 1956151..1957086 (+) | 936 | WP_215595950.1 | aldo/keto reductase | - |
| EXW25_RS09915 (EXW25_10085) | - | 1957328..1957552 (-) | 225 | WP_000162608.1 | hypothetical protein | - |
| EXW25_RS09920 (EXW25_10090) | - | 1957637..1957984 (-) | 348 | WP_000426317.1 | DUF4257 domain-containing protein | - |
| EXW25_RS09925 (EXW25_10095) | - | 1958179..1958706 (+) | 528 | WP_097953352.1 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10635.40 Da Isoelectric Point: 5.8675
>NTDB_id=346877 EXW25_RS09895 WP_000648323.1 1954195..1954482(+) (abrB) [Bacillus toyonensis strain JAS411]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVDEDKVILQKYEPYNACQITGDVSDQNISLANGNITVSIDGAK
HLIKEIEKFLKKSEI
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVDEDKVILQKYEPYNACQITGDVSDQNISLANGNITVSIDGAK
HLIKEIEKFLKKSEI
Nucleotide
Download Length: 288 bp
>NTDB_id=346877 EXW25_RS09895 WP_000648323.1 1954195..1954482(+) (abrB) [Bacillus toyonensis strain JAS411]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTAAGAGATGTATTAGG
TATACAAATTAAATCACCACTTGAAATTTTCGTAGATGAAGATAAAGTCATTTTACAAAAATATGAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAGAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
CATTTAATAAAAGAAATAGAGAAGTTTTTAAAAAAAAGTGAGATTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTAAGAGATGTATTAGG
TATACAAATTAAATCACCACTTGAAATTTTCGTAGATGAAGATAAAGTCATTTTACAAAAATATGAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAGAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
CATTTAATAAAAGAAATAGAGAAGTTTTTAAAAAAAAGTGAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.044 |
95.789 |
0.537 |