Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW34_RS09880 | Genome accession | NZ_CP036102 |
| Coordinates | 1960728..1961015 (+) | Length | 95 a.a. |
| NCBI ID | WP_002012401.1 | Uniprot ID | A0A366G1Y4 |
| Organism | Bacillus mycoides strain JAS391 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1955728..1966015
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW34_RS09860 (EXW34_10005) | - | 1956910..1957110 (+) | 201 | WP_002031430.1 | DUF4083 domain-containing protein | - |
| EXW34_RS09865 (EXW34_10010) | - | 1957138..1957599 (+) | 462 | WP_002141378.1 | NUDIX hydrolase | - |
| EXW34_RS09870 (EXW34_10015) | nadE | 1957645..1958463 (-) | 819 | WP_002031433.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW34_RS09875 (EXW34_10020) | - | 1958728..1960608 (+) | 1881 | WP_002031435.1 | FtsX-like permease family protein | - |
| EXW34_RS09880 (EXW34_10025) | abrB | 1960728..1961015 (+) | 288 | WP_002012401.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW34_RS09885 (EXW34_10030) | - | 1961350..1962300 (+) | 951 | WP_002012402.1 | serine protease | - |
| EXW34_RS09890 (EXW34_10035) | - | 1962341..1962649 (-) | 309 | WP_001259916.1 | helix-turn-helix transcriptional regulator | - |
| EXW34_RS09895 (EXW34_10040) | - | 1962756..1963691 (+) | 936 | WP_002189331.1 | aldo/keto reductase | - |
| EXW34_RS09900 (EXW34_10045) | - | 1963741..1963944 (+) | 204 | WP_002189333.1 | hypothetical protein | - |
| EXW34_RS09905 (EXW34_10050) | - | 1964001..1964225 (-) | 225 | WP_002012407.1 | hypothetical protein | - |
| EXW34_RS09910 (EXW34_10055) | - | 1964310..1964657 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
| EXW34_RS09915 (EXW34_10060) | - | 1964854..1965381 (+) | 528 | WP_002189339.1 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10647.42 Da Isoelectric Point: 6.9795
>NTDB_id=346826 EXW34_RS09880 WP_002012401.1 1960728..1961015(+) (abrB) [Bacillus mycoides strain JAS391]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
Nucleotide
Download Length: 288 bp
>NTDB_id=346826 EXW34_RS09880 WP_002012401.1 1960728..1961015(+) (abrB) [Bacillus mycoides strain JAS391]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGAGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGACCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |