Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   GII85_RS09515 Genome accession   NZ_CP045817
Coordinates   1891571..1893574 (+) Length   667 a.a.
NCBI ID   WP_003231593.1    Uniprot ID   -
Organism   Bacillus subtilis strain P5_B1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1886571..1898574
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII85_RS09480 (GII85_09480) pghL 1886934..1887692 (+) 759 WP_041850786.1 gamma-polyglutamate hydrolase PghL -
  GII85_RS09485 (GII85_09485) - 1887719..1888168 (-) 450 WP_015483284.1 YndM family protein -
  GII85_RS09490 (GII85_09490) fosM 1888377..1888811 (+) 435 WP_032725818.1 FosM family fosfomycin resistance protein -
  GII85_RS21030 - 1888720..1888997 (+) 278 Protein_1819 hypothetical protein -
  GII85_RS09495 (GII85_09495) dinR/lexA 1889349..1889966 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  GII85_RS09500 (GII85_09500) yneA 1890116..1890433 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  GII85_RS09505 (GII85_09505) dinL 1890452..1891105 (+) 654 WP_041850785.1 recombinase family protein -
  GII85_RS09510 (GII85_09510) ynzC 1891169..1891402 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  GII85_RS09515 (GII85_09515) recP/tkt 1891571..1893574 (+) 2004 WP_003231593.1 transketolase Machinery gene
  GII85_RS09520 (GII85_09520) sirA 1893727..1894173 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  GII85_RS09525 (GII85_09525) yneF 1894259..1894477 (+) 219 WP_003221221.1 YneF family protein -
  GII85_RS09530 (GII85_09530) ynzD 1894551..1894724 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  GII85_RS09535 (GII85_09535) ccdA 1894944..1895651 (+) 708 WP_041850784.1 cytochrome c-type biogenesis protein CcdA -
  GII85_RS09540 (GII85_09540) yneI 1895740..1896102 (+) 363 WP_014476939.1 response regulator -
  GII85_RS09545 (GII85_09545) yneJ 1896181..1896672 (+) 492 WP_010886519.1 CcdC family protein -
  GII85_RS09550 (GII85_09550) yneK 1896703..1897131 (-) 429 WP_003231580.1 DynA interaction protein YneK -
  GII85_RS09555 (GII85_09555) cotM 1897367..1897759 (-) 393 WP_072174018.1 outer spore coat protein CotM -
  GII85_RS09560 (GII85_09560) sspP 1897840..1897986 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  GII85_RS09565 (GII85_09565) sspO 1898018..1898164 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72316.39 Da        Isoelectric Point: 4.7291

>NTDB_id=346804 GII85_RS09515 WP_003231593.1 1891571..1893574(+) (recP/tkt) [Bacillus subtilis strain P5_B1]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTSEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=346804 GII85_RS09515 WP_003231593.1 1891571..1893574(+) (recP/tkt) [Bacillus subtilis strain P5_B1]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTATGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGTCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCAATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACATCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCTTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCTGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562


Multiple sequence alignment