Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   EXW48_RS06225 Genome accession   NZ_CP036101
Coordinates   1257587..1257763 (+) Length   58 a.a.
NCBI ID   WP_001003337.1    Uniprot ID   A0A2A8PRE8
Organism   Bacillus wiedmannii strain JAS28/2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1252587..1262763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW48_RS06205 (EXW48_06240) - 1253967..1255427 (+) 1461 WP_215561589.1 IS1182-like element ISBcy1 family transposase -
  EXW48_RS06210 (EXW48_06245) - 1255558..1255740 (-) 183 WP_001211110.1 YjzD family protein -
  EXW48_RS06215 (EXW48_06250) - 1255897..1256631 (+) 735 WP_000028707.1 hydrolase -
  EXW48_RS06220 (EXW48_06255) - 1256661..1257533 (+) 873 WP_215562856.1 NAD(P)-dependent oxidoreductase -
  EXW48_RS06225 (EXW48_06260) comZ 1257587..1257763 (+) 177 WP_001003337.1 ComZ family protein Regulator
  EXW48_RS06230 (EXW48_06265) fabH 1257995..1258927 (+) 933 WP_001100551.1 beta-ketoacyl-ACP synthase III -
  EXW48_RS06235 (EXW48_06270) fabF 1258959..1260197 (+) 1239 WP_000412646.1 beta-ketoacyl-ACP synthase II -
  EXW48_RS06240 (EXW48_06275) - 1260304..1261092 (+) 789 WP_046957009.1 DUF2268 domain-containing putative Zn-dependent protease -
  EXW48_RS06245 (EXW48_06280) - 1261236..1261982 (+) 747 WP_000966120.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6548.72 Da        Isoelectric Point: 4.6653

>NTDB_id=346770 EXW48_RS06225 WP_001003337.1 1257587..1257763(+) (comZ) [Bacillus wiedmannii strain JAS28/2]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=346770 EXW48_RS06225 WP_001003337.1 1257587..1257763(+) (comZ) [Bacillus wiedmannii strain JAS28/2]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATCTTAGATTCGAATGG
AATTGCGCTTGATATGGAGAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A8PRE8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment