Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW47_RS09865 | Genome accession | NZ_CP036099 |
| Coordinates | 1928125..1928412 (+) | Length | 95 a.a. |
| NCBI ID | WP_002012401.1 | Uniprot ID | A0A366G1Y4 |
| Organism | Bacillus mycoides strain JAS23/1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1923125..1933412
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW47_RS09845 (EXW47_10010) | - | 1924315..1924502 (+) | 188 | Protein_1870 | DUF4083 domain-containing protein | - |
| EXW47_RS09850 (EXW47_10015) | - | 1924530..1924991 (+) | 462 | WP_002130989.1 | NUDIX hydrolase | - |
| EXW47_RS09855 (EXW47_10020) | nadE | 1925036..1925854 (-) | 819 | WP_002012398.1 | ammonia-dependent NAD(+) synthetase | - |
| EXW47_RS09860 (EXW47_10025) | - | 1926125..1928005 (+) | 1881 | WP_002012400.1 | ABC transporter permease | - |
| EXW47_RS09865 (EXW47_10030) | abrB | 1928125..1928412 (+) | 288 | WP_002012401.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW47_RS09870 (EXW47_10035) | - | 1928747..1929697 (+) | 951 | WP_002012402.1 | serine protease | - |
| EXW47_RS09875 (EXW47_10040) | - | 1929738..1930046 (-) | 309 | WP_002012403.1 | helix-turn-helix transcriptional regulator | - |
| EXW47_RS09880 (EXW47_10045) | - | 1930154..1931089 (+) | 936 | WP_063226473.1 | aldo/keto reductase | - |
| EXW47_RS09885 (EXW47_10050) | - | 1931139..1932314 (+) | 1176 | WP_215561066.1 | MFS transporter | - |
| EXW47_RS09890 (EXW47_10060) | - | 1932499..1932723 (-) | 225 | WP_002012407.1 | hypothetical protein | - |
| EXW47_RS09895 (EXW47_10065) | - | 1932808..1933155 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10647.42 Da Isoelectric Point: 6.9795
>NTDB_id=346728 EXW47_RS09865 WP_002012401.1 1928125..1928412(+) (abrB) [Bacillus mycoides strain JAS23/1]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
Nucleotide
Download Length: 288 bp
>NTDB_id=346728 EXW47_RS09865 WP_002012401.1 1928125..1928412(+) (abrB) [Bacillus mycoides strain JAS23/1]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGTATAGTTATTCCTAAAGAATTACGGGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCATACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGTATAGTTATTCCTAAAGAATTACGGGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCATACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |