Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EXW47_RS06480 | Genome accession | NZ_CP036099 |
| Coordinates | 1275362..1275685 (-) | Length | 107 a.a. |
| NCBI ID | WP_002030429.1 | Uniprot ID | A0A084J505 |
| Organism | Bacillus mycoides strain JAS23/1 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
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Genomic Context
Location: 1270362..1280685
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW47_RS06455 (EXW47_06575) | - | 1270541..1271827 (+) | 1287 | WP_002126097.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| EXW47_RS06460 (EXW47_06580) | sipW | 1272024..1272593 (+) | 570 | WP_002064334.1 | signal peptidase I SipW | - |
| EXW47_RS06465 (EXW47_06585) | - | 1272660..1273247 (+) | 588 | WP_000172837.1 | CalY family protein | - |
| EXW47_RS06470 (EXW47_06590) | - | 1273409..1274242 (+) | 834 | WP_002168858.1 | DUF4047 domain-containing protein | - |
| EXW47_RS06475 (EXW47_06595) | calY | 1274686..1275279 (+) | 594 | WP_002126106.1 | biofilm matrix protein CalY | - |
| EXW47_RS06480 (EXW47_06600) | sinR | 1275362..1275685 (-) | 324 | WP_002030429.1 | helix-turn-helix domain-containing protein | Regulator |
| EXW47_RS06485 (EXW47_06605) | - | 1275765..1275899 (-) | 135 | WP_002011474.1 | anti-repressor SinI family protein | - |
| EXW47_RS06490 (EXW47_06610) | inhA1 | 1276242..1278629 (+) | 2388 | WP_215560991.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| EXW47_RS06495 (EXW47_06615) | - | 1278800..1280167 (+) | 1368 | WP_002126112.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12274.04 Da Isoelectric Point: 7.2050
>NTDB_id=346725 EXW47_RS06480 WP_002030429.1 1275362..1275685(-) (sinR) [Bacillus mycoides strain JAS23/1]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTEGHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTEGHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
Nucleotide
Download Length: 324 bp
>NTDB_id=346725 EXW47_RS06480 WP_002030429.1 1275362..1275685(-) (sinR) [Bacillus mycoides strain JAS23/1]
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGCATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTCGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAGGGTCACCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGCATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTCGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAGGGTCACCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |