Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GII86_RS18505 Genome accession   NZ_CP045816
Coordinates   3459152..3459865 (-) Length   237 a.a.
NCBI ID   WP_015384738.1    Uniprot ID   -
Organism   Bacillus subtilis strain P5_B2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3454152..3464865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII86_RS18485 (GII86_18485) ghrB 3454297..3455274 (+) 978 WP_072173470.1 D-glycerate dehydrogenase -
  GII86_RS18490 (GII86_18490) psdB 3455311..3457251 (-) 1941 WP_032726921.1 lantibiotic ABC transporter permease PsdB -
  GII86_RS18495 (GII86_18495) psdA 3457226..3458005 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  GII86_RS18500 (GII86_18500) psdS 3458088..3459158 (-) 1071 WP_046160885.1 two-component sensor histidine kinase PsdS -
  GII86_RS18505 (GII86_18505) braR 3459152..3459865 (-) 714 WP_015384738.1 two-component system response regulator PsdR Regulator
  GII86_RS18510 (GII86_18510) - 3460012..3460221 (+) 210 WP_017695274.1 hypothetical protein -
  GII86_RS18515 (GII86_18515) yvcN 3460257..3461021 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  GII86_RS18520 (GII86_18520) crh 3461022..3461279 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  GII86_RS18525 (GII86_18525) whiA 3461303..3462253 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  GII86_RS18530 (GII86_18530) mgfK 3462276..3463229 (-) 954 WP_046161093.1 gluconeogenesis morphogenetic factor -
  GII86_RS18535 (GII86_18535) rapZ 3463231..3464118 (-) 888 WP_003243903.1 RNase adapter RapZ -
  GII86_RS18540 (GII86_18540) rppI 3464143..3464619 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27529.40 Da        Isoelectric Point: 4.6774

>NTDB_id=346706 GII86_RS18505 WP_015384738.1 3459152..3459865(-) (braR) [Bacillus subtilis strain P5_B2]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=346706 GII86_RS18505 WP_015384738.1 3459152..3459865(-) (braR) [Bacillus subtilis strain P5_B2]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment