Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   EXW54_RS05790 Genome accession   NZ_CP036094
Coordinates   1131185..1131361 (+) Length   58 a.a.
NCBI ID   WP_001003338.1    Uniprot ID   A0A1V6LL20
Organism   Bacillus toyonensis strain JAS22/1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1126185..1136361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW54_RS05770 (EXW54_05895) clpC 1126508..1129108 (+) 2601 WP_098623757.1 ATP-dependent chaperone ClpB Regulator
  EXW54_RS05775 (EXW54_05900) - 1129145..1129327 (-) 183 WP_001211112.1 YjzD family protein -
  EXW54_RS05780 (EXW54_05905) - 1129484..1130218 (+) 735 WP_000028709.1 hypothetical protein -
  EXW54_RS05785 (EXW54_05910) - 1130248..1131120 (+) 873 WP_142331285.1 NAD(P)-dependent oxidoreductase -
  EXW54_RS05790 (EXW54_05915) comZ 1131185..1131361 (+) 177 WP_001003338.1 ComZ family protein Regulator
  EXW54_RS05795 (EXW54_05920) fabH 1131606..1132538 (+) 933 WP_001100553.1 beta-ketoacyl-ACP synthase III -
  EXW54_RS05800 (EXW54_05925) fabF 1132569..1133807 (+) 1239 WP_000412641.1 beta-ketoacyl-ACP synthase II -
  EXW54_RS05805 (EXW54_05930) - 1133915..1134706 (+) 792 WP_000539317.1 DUF2268 domain-containing putative Zn-dependent protease -
  EXW54_RS05810 (EXW54_05935) - 1134849..1135595 (+) 747 WP_000966122.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6606.76 Da        Isoelectric Point: 4.4963

>NTDB_id=346671 EXW54_RS05790 WP_001003338.1 1131185..1131361(+) (comZ) [Bacillus toyonensis strain JAS22/1]
MNEKSMQFLQIAMKHLPEAKAILDSNGIELDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=346671 EXW54_RS05790 WP_001003338.1 1131185..1131361(+) (comZ) [Bacillus toyonensis strain JAS22/1]
ATGAACGAAAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAGGCAAAGGCAATTTTAGATTCGAATGG
AATTGAGCTTGATATGGAGAAGGCACAACCAGTGTTAGAGTTATTAATGAAAGTTATGAATGAAGCATATGAGCTTGGGA
AAGCAGACAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V6LL20

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

63.636

94.828

0.603

Multiple sequence alignment