Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   GII86_RS09895 Genome accession   NZ_CP045816
Coordinates   1882767..1883384 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain P5_B2     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1877767..1888384
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII86_RS09870 (GII86_09870) yndJ 1878082..1879722 (+) 1641 WP_046160441.1 YndJ family protein -
  GII86_RS09875 (GII86_09875) - 1879812..1880126 (+) 315 Protein_1911 hypothetical protein -
  GII86_RS09880 (GII86_09880) pghL 1880351..1881109 (+) 759 WP_046160442.1 gamma-polyglutamate hydrolase PghL -
  GII86_RS09885 (GII86_09885) - 1881136..1881585 (-) 450 WP_003245454.1 YndM family protein -
  GII86_RS09890 (GII86_09890) fosM 1881794..1882228 (+) 435 WP_032725818.1 FosM family fosfomycin resistance protein -
  GII86_RS22175 - 1882137..1882414 (+) 278 Protein_1915 hypothetical protein -
  GII86_RS09895 (GII86_09895) dinR/lexA 1882767..1883384 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  GII86_RS09900 (GII86_09900) yneA 1883534..1883851 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  GII86_RS09905 (GII86_09905) dinL 1883870..1884523 (+) 654 WP_015714011.1 recombinase family protein -
  GII86_RS09910 (GII86_09910) ynzC 1884587..1884820 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  GII86_RS09915 (GII86_09915) recP/tkt 1884989..1886992 (+) 2004 WP_003231593.1 transketolase Machinery gene
  GII86_RS09920 (GII86_09920) sirA 1887145..1887591 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  GII86_RS09925 (GII86_09925) yneF 1887677..1887895 (+) 219 WP_003221221.1 YneF family protein -
  GII86_RS09930 (GII86_09930) ynzD 1887969..1888142 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=346654 GII86_RS09895 WP_003238209.1 1882767..1883384(-) (dinR/lexA) [Bacillus subtilis strain P5_B2]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=346654 GII86_RS09895 WP_003238209.1 1882767..1883384(-) (dinR/lexA) [Bacillus subtilis strain P5_B2]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCATC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCAGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACTGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACACACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATAGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1